RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 ITIH2P19823 946 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 APBB1IPQ7Z5R6 666 aaPredicted RBP14.24□□□□□ -0.13
SCAF4-201ENST00000286835 SPIRE2Q8WWL2 714 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 CENPTQ96BT3 561 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 ZNF317Q96PQ6 595 aaPredicted RBP14.24□□□□□ -0.13
SCAF4-201ENST00000286835 ROPN1BQ9BZX4 212 aaPredicted RBP14.24□□□□□ -0.13
SCAF4-201ENST00000286835 ROPN1Q9HAT0 212 aaPredicted RBP14.24□□□□□ -0.13
SCAF4-201ENST00000286835 UBN1Q9NPG3 1134 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 PRR12Q9ULL5 1215 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 MYH7BA7E2Y1 1941 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 GTPBP10A4D1E9 387 aaKnown RBP14.24□□□□□ -0.13
SCAF4-201ENST00000286835 C5orf60A6NFR6 353 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 TTC4O95801 387 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 KRT1P04264 644 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 BBS9Q3SYG4 887 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 AP1ARQ63HQ0 302 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 GADL1Q6ZQY3 521 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 ZC3H18Q86VM9 953 aaKnown RBP14.24□□□□□ -0.13
SCAF4-201ENST00000286835 MKNK1Q9BUB5 465 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 TRAIPQ9BWF2 469 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 SLCO1B3Q9NPD5 702 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 GRHL1Q9NZI5 618 aa14.24□□□□□ -0.13
SCAF4-201ENST00000286835 FAM47DPA6NHR8 397 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 TBX3O15119 743 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 EIF3DO15371 548 aaKnown RBP eCLIP14.23□□□□□ -0.13
SCAF4-201ENST00000286835 CBX6O95503 412 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 GGPS1O95749 300 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 TM4SF1P30408 202 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 JAM2P57087 298 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 RRP1BQ14684 758 aaKnown RBP14.23□□□□□ -0.13
SCAF4-201ENST00000286835 ANKRD20A2Q5SQ80 823 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 ANKRD20A1Q5TYW2 823 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 ATL2Q8NHH9 583 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 ETNPPLQ8TBG4 499 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 RMDN2Q96LZ7 410 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 SERPINB12Q96P63 405 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 FAM213AQ9BRX8 229 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 KCNQ5Q9NR82 932 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 ADAM22Q9P0K1 906 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 KRT10P13645 584 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 BIRC2Q13490 618 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 C6orf163Q5TEZ5 329 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 BTNL9Q6UXG8 535 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 FITM2Q8N6M3 262 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 PDCD7Q8N8D1 485 aaKnown RBP14.23□□□□□ -0.13
SCAF4-201ENST00000286835 TTC17Q96AE7 1141 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 IMPG2Q9BZV3 1241 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 KMT5AQ9NQR1 393 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 OLFML3Q9NRN5 406 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 ANKFY1Q9P2R3 1169 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 SEL1LQ9UBV2 794 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 CNOT7Q9UIV1 285 aaKnown RBP14.23□□□□□ -0.13
SCAF4-201ENST00000286835 ZNRF3Q9ULT6 936 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 MRPL11Q9Y3B7 192 aaKnown RBP14.23□□□□□ -0.13
SCAF4-201ENST00000286835 EDIL3O43854 480 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 ECE1P42892 770 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 MKRN3Q13064 507 aaKnown RBP14.23□□□□□ -0.13
SCAF4-201ENST00000286835 DMP1Q13316 513 aaPredicted RBP14.23□□□□□ -0.13
SCAF4-201ENST00000286835 PLA2G4FQ68DD2 849 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 SPOCK2Q92563 424 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 PHTF1Q9UMS5 762 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 PAEPP09466 180 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 SREBF1P36956 1147 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 PIK3CAP42336 1068 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 NOP14P78316 857 aaKnown RBP14.23□□□□□ -0.13
SCAF4-201ENST00000286835 PPATQ06203 517 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 PDIA2Q13087 525 aaKnown RBP14.23□□□□□ -0.13
SCAF4-201ENST00000286835 HYIQ5T013 277 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 KRT39Q6A163 491 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 CYFIP1Q7L576 1253 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 CYTH2Q99418 400 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 POLR3CQ9BUI4 534 aaPredicted RBP14.23□□□□□ -0.13
SCAF4-201ENST00000286835 UNC45AQ9H3U1 944 aa14.23□□□□□ -0.13
SCAF4-201ENST00000286835 SNED1Q8TER0 1413 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 CD19P15391 556 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 RRM1P23921 792 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 MAN1A1P33908 653 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 MAGEA4P43358 317 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 ARSEP51690 589 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 CFAP61Q8NHU2 1237 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 PCDHB18PQ96TA0 734 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 TSC22D3Q99576 134 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 RXFP1Q9HBX9 757 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 TUFT1Q9NNX1 390 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.22□□□□□ -0.13
SCAF4-201ENST00000286835 USP20Q9Y2K6 914 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 DENND3A2RUS2 1198 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 GJB6O95452 261 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 ASNSP08243 561 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 CYP11B1P15538 503 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 SNRNP35Q16560 246 aaKnown RBP14.22□□□□□ -0.13
SCAF4-201ENST00000286835 MDH1BQ5I0G3 518 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 TMEM270Q6UE05 265 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 BZW1Q7L1Q6 419 aaKnown RBP14.22□□□□□ -0.13
SCAF4-201ENST00000286835 RILPQ96NA2 401 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 METTL5Q9NRN9 209 aaKnown RBP14.22□□□□□ -0.13
SCAF4-201ENST00000286835 GINM1Q9NU53 330 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 ROBO3Q96MS0 1386 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 PLSCR1O15162 318 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 BRDTQ58F21 947 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms