RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 GPATCH11Q8N954 259 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 C1orf54Q8WWF1 131 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 ZWILCHQ9H900 591 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 KIAA1551Q9HCM1 1747 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 TXNRD2Q9NNW7 524 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 ZNF446Q9NWS9 450 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 SBF2Q86WG5 1849 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 MAST2Q6P0Q8 1798 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 TOM1L1O75674 476 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 PPIL2Q13356 520 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 PRAMEF19Q5SWL8 479 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 CCNI2Q6ZMN8 369 aaPredicted RBP9.61□□□□□ -0.87
SEC16A-201ENST00000277537 CREG2Q8IUH2 290 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 ATP8B4Q8TF62 1192 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 FAM81BQ96LP2 452 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 PARK7Q99497 189 aaKnown RBP9.61□□□□□ -0.87
SEC16A-201ENST00000277537 SENP7Q9BQF6 1050 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 TRIM51Q9BSJ1 452 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 HESX1Q9UBX0 185 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 AGAP1Q9UPQ3 857 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 PCDHB2Q9Y5E7 798 aa9.61□□□□□ -0.87
SEC16A-201ENST00000277537 SPDYE5A6NIY4 337 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 PI4K2BG5E9Z4 385 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 FARP2O94887 1054 aaPredicted RBP9.6□□□□□ -0.87
SEC16A-201ENST00000277537 TBXAS1P24557 533 aaPredicted RBP9.6□□□□□ -0.87
SEC16A-201ENST00000277537 KCNJ1P48048 391 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 MYL6P60660 151 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 SNRPFP62306 86 aaKnown RBP9.6□□□□□ -0.87
SEC16A-201ENST00000277537 LAMC2Q13753 1193 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 MYBPC2Q14324 1141 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 SURF1Q15526 300 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 OR6B2Q6IFH4 312 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 NOP9Q86U38 636 aaKnown RBP9.6□□□□□ -0.87
SEC16A-201ENST00000277537 PALB2Q86YC2 1186 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 TMEM35BQ8NCS4 154 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 OR6B3Q8NGW1 331 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 LNX1Q8TBB1 728 aaPredicted RBP9.6□□□□□ -0.87
SEC16A-201ENST00000277537 SEMA4DQ92854 862 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 CYFIP2Q96F07 1278 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 KIF12Q96FN5 646 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 XPNPEP1Q9NQW7 623 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 H3BRB1 525 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 ATP2C2O75185 946 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 RNF8O76064 485 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 KIAA0754O94854 1291 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 LYPLA2O95372 231 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 C6orf222P0C671 652 aaPredicted RBP9.6□□□□□ -0.87
SEC16A-201ENST00000277537 BRD2P25440 801 aaKnown RBP9.6□□□□□ -0.87
SEC16A-201ENST00000277537 GTF2H1P32780 548 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 GLRA4Q5JXX5 417 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 BEND6Q5SZJ8 279 aaPredicted RBP9.6□□□□□ -0.87
SEC16A-201ENST00000277537 TWF2Q6IBS0 349 aaKnown RBP9.6□□□□□ -0.87
SEC16A-201ENST00000277537 ENOSF1Q7L5Y1 443 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 USP38Q8NB14 1042 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 FAM71BQ8TC56 605 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 C12orf42Q96LP6 360 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 CALN1Q9BXU9 219 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 FUT8Q9BYC5 575 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 TUT1Q9H6E5 874 aaKnown RBP9.6□□□□□ -0.87
SEC16A-201ENST00000277537 KCNK9Q9NPC2 374 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 PCSK1NQ9UHG2 260 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 LTBP3Q9NS15 1303 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 CCDC188H7C350 402 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 ADCY3O60266 1144 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 KRT1P04264 644 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 CXCL8P10145 99 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 ITGA4P13612 1032 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 TNFSF9P41273 254 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 SLCO1A2P46721 670 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 CAPSQ13938 189 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 ZBTB41Q5SVQ8 909 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 RNF187Q5TA31 235 aaPredicted RBP9.6□□□□□ -0.87
SEC16A-201ENST00000277537 TTC16Q8NEE8 873 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 FAM149B1Q96BN6 582 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 TRIM11Q96F44 468 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 MED4Q9NPJ6 270 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 SETD4Q9NVD3 440 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 ZNF112Q9UJU3 913 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 ADAM21Q9UKJ8 722 aa9.6□□□□□ -0.87
SEC16A-201ENST00000277537 RPTORQ8N122 1335 aa9.59□□□□□ -0.87
SEC16A-201ENST00000277537 MIF4GDA9UHW6 222 aaKnown RBP9.59□□□□□ -0.87
SEC16A-201ENST00000277537 OGTO15294 1046 aa9.59□□□□□ -0.87
SEC16A-201ENST00000277537 ZRANB2O95218 330 aaKnown RBP eCLIP9.59□□□□□ -0.87
SEC16A-201ENST00000277537 PLA2G4AP47712 749 aa9.59□□□□□ -0.87
SEC16A-201ENST00000277537 NCKAP1LP55160 1127 aa9.59□□□□□ -0.87
SEC16A-201ENST00000277537 CUL2Q13617 745 aa9.59□□□□□ -0.87
SEC16A-201ENST00000277537 PLCB4Q15147 1175 aa9.59□□□□□ -0.87
SEC16A-201ENST00000277537 MEI1Q5TIA1 1274 aa9.59□□□□□ -0.87
SEC16A-201ENST00000277537 SLC9A9Q8IVB4 645 aa9.59□□□□□ -0.87
SEC16A-201ENST00000277537 CEP120Q8N960 986 aa9.59□□□□□ -0.87
SEC16A-201ENST00000277537 REPS2Q8NFH8 660 aa9.59□□□□□ -0.87
SEC16A-201ENST00000277537 TMC2Q8TDI7 906 aa9.59□□□□□ -0.87
SEC16A-201ENST00000277537 TAF1DQ9H5J8 278 aaPredicted RBP9.59□□□□□ -0.87
SEC16A-201ENST00000277537 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.59□□□□□ -0.87
SEC16A-201ENST00000277537 SASH3O75995 380 aa9.59□□□□□ -0.87
SEC16A-201ENST00000277537 CTSHP09668 335 aa9.59□□□□□ -0.87
SEC16A-201ENST00000277537 YBX3P16989 372 aaKnown RBP eCLIP9.59□□□□□ -0.876e-7■□□□□ 10.3
SEC16A-201ENST00000277537 RRM1P23921 792 aa9.59□□□□□ -0.87
SEC16A-201ENST00000277537 ADSSP30520 456 aa9.59□□□□□ -0.87
SEC16A-201ENST00000277537 SLC8A3P57103 927 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms