RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 OVOS2Q6IE36 1432 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 ZSCAN9O15535 394 aaPredicted RBP12.09□□□□□ -0.47
USP53-201ENST00000274030 ANTXR2P58335 489 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 CUL3Q13618 768 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 SKIV2LQ15477 1246 aaKnown RBP12.09□□□□□ -0.47
USP53-201ENST00000274030 ANGEL2Q5VTE6 544 aaKnown RBP12.09□□□□□ -0.47
USP53-201ENST00000274030 C4orf33Q8N1A6 199 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 KCNF1Q9H3M0 494 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 UNC45AQ9H3U1 944 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 A0A1B0GTH6 734 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 SYF2O95926 243 aaKnown RBP12.09□□□□□ -0.47
USP53-201ENST00000274030 PDHBP11177 359 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 GFAPP14136 432 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 CYP2B6P20813 491 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 MAGEA9P43362 315 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 PTK2BQ14289 1009 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 LRRC8EQ6NSJ5 796 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 RBBP8NLQ8NC74 664 aaPredicted RBP12.09□□□□□ -0.47
USP53-201ENST00000274030 AARSP49588 968 aaKnown RBP eCLIP12.09□□□□□ -0.47
USP53-201ENST00000274030 FBXW4P57775 412 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 SMTNL2Q2TAL5 461 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 STRIP1Q5VSL9 837 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 APPL2Q8NEU8 664 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 RIN2Q8WYP3 895 aaPredicted RBP12.09□□□□□ -0.47
USP53-201ENST00000274030 PABPC5Q96DU9 382 aaKnown RBP12.09□□□□□ -0.47
USP53-201ENST00000274030 DACH2Q96NX9 599 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 NR1H4Q96RI1 486 aaPredicted RBP12.09□□□□□ -0.47
USP53-201ENST00000274030 STK33Q9BYT3 514 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 TMEM39BQ9GZU3 492 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 TRABDQ9H4I3 376 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 LCMT1Q9UIC8 334 aa12.09□□□□□ -0.47
USP53-201ENST00000274030 FARP1Q9Y4F1 1045 aaPredicted RBP12.09□□□□□ -0.47
USP53-201ENST00000274030 RALAP11233 206 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 NPEPPSP55786 919 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 DAB2P98082 770 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 GRIN1Q05586 938 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 DHX34Q14147 1143 aaKnown RBP12.08□□□□□ -0.48
USP53-201ENST00000274030 VEPH1Q14D04 833 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 EPAS1Q99814 870 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 CENPKQ9BS16 269 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 NRKQ7Z2Y5 1582 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 SRGNP10124 158 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 PYGBP11216 843 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 RASA1P20936 1047 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 PCSK7Q16549 785 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 RAET1EQ8TD07 263 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 AGBL1Q96MI9 1066 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 TNS3Q68CZ2 1445 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 STXBP3O00186 592 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 ATXN3P54252 364 aaPredicted RBP12.08□□□□□ -0.48
USP53-201ENST00000274030 TMEM132DQ14C87 1099 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 TAF1CQ15572 869 aaPredicted RBP12.08□□□□□ -0.48
USP53-201ENST00000274030 ZNF280CQ8ND82 737 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 RBM15Q96T37 977 aaKnown RBP eCLIP12.08□□□□□ -0.48
USP53-201ENST00000274030 KLF6Q99612 283 aaPredicted RBP12.08□□□□□ -0.48
USP53-201ENST00000274030 KIFC3Q9BVG8 833 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 ZNF70Q9UC06 446 aaPredicted RBP12.08□□□□□ -0.48
USP53-201ENST00000274030 ZC3H4Q9UPT8 1303 aaKnown RBP12.08□□□□□ -0.48
USP53-201ENST00000274030 GJB7Q6PEY0 223 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 UBA3Q8TBC4 463 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 IL25Q9H293 177 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 KIF17Q9P2E2 1029 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 STOML1Q9UBI4 398 aa12.08□□□□□ -0.48
USP53-201ENST00000274030 ATP5HO75947 161 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 LMNAP02545 664 aaKnown RBP12.07□□□□□ -0.48
USP53-201ENST00000274030 FDX1P10109 184 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 ZFXP17010 805 aaPredicted RBP12.07□□□□□ -0.48
USP53-201ENST00000274030 KCNJ1P48048 391 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 AP3M2P53677 418 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 PRKCEQ02156 737 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 CATSPER3Q86XQ3 398 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 SEPT1Q8WYJ6 367 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 PDLIM2Q96JY6 352 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 CALR3Q96L12 384 aaKnown RBP12.07□□□□□ -0.48
USP53-201ENST00000274030 YIPF3Q9GZM5 350 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 AURKCQ9UQB9 309 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 TADA2AO75478 443 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 ENO1P06733 434 aaKnown RBP12.07□□□□□ -0.48
USP53-201ENST00000274030 RBP5P82980 135 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 EMC2Q15006 297 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 RAD9BQ6WBX8 426 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 LINC00116Q8NCU8 138 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 C7orf25Q9BPX7 421 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 ABCC3O15438 1527 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 PRPF4O43172 522 aaKnown RBP eCLIP12.07□□□□□ -0.48
USP53-201ENST00000274030 TMCC1O94876 653 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 CAMTA2O94983 1202 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 RAD51Q06609 339 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 TTC39CQ8N584 583 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 SENP7Q9BQF6 1050 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 SEC24DO94855 1032 aaPredicted RBP12.07□□□□□ -0.48
USP53-201ENST00000274030 RHOBTB3O94955 611 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 ASMTLO95671 621 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 HOXD10P28358 340 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 RAD23BP54727 409 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 CCZ1BP86790 482 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 CCZ1P86791 482 aaPredicted RBP12.07□□□□□ -0.48
USP53-201ENST00000274030 TAGAPQ8N103 731 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 OTULINQ96BN8 352 aa12.07□□□□□ -0.48
USP53-201ENST00000274030 GGA3Q9NZ52 723 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms