RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 SLC9A2Q9UBY0 812 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 FBXL21Q9UKT6 434 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 A0A087X0T9 212 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 RNF103O00237 685 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 AKAP10O43572 662 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 GUCY1A2P33402 732 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 PRELPP51888 382 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 SLC25A24Q6NUK1 477 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 ATPAF2Q8N5M1 289 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 MCPH1Q8NEM0 835 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 ZSCAN18Q8TBC5 510 aaPredicted RBP13.25□□□□□ -0.29
CDH11-201ENST00000268603 PLAAQ9Y263 795 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 V9GYQ6 96 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 ITSN2Q9NZM3 1697 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 MTRF1O75570 445 aaKnown RBP13.25□□□□□ -0.29
CDH11-201ENST00000268603 FLT3P36888 993 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 FEN1P39748 380 aaKnown RBP13.25□□□□□ -0.29
CDH11-201ENST00000268603 PTH1RQ03431 593 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 MARCH10Q8NA82 808 aaPredicted RBP13.25□□□□□ -0.29
CDH11-201ENST00000268603 KIAA1586Q9HCI6 787 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 ARHGEF38Q9NXL2 777 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 FEM1BQ9UK73 627 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 MLH1P40692 756 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 CCDC103Q8IW40 242 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 PHACTR4Q8IZ21 702 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 SIKE1Q9BRV8 207 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 NUP85Q9BW27 656 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 IP6K2Q9UHH9 426 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.25□□□□□ -0.29
CDH11-201ENST00000268603 SESN2P58004 480 aaPredicted RBP13.25□□□□□ -0.29
CDH11-201ENST00000268603 IFNEQ86WN2 208 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 APOBEC3FQ8IUX4 373 aaKnown RBP13.25□□□□□ -0.29
CDH11-201ENST00000268603 SEC31BQ9NQW1 1179 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 DCDC2Q9UHG0 476 aa13.25□□□□□ -0.29
CDH11-201ENST00000268603 CHUKO15111 745 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 C6orf222P0C671 652 aaPredicted RBP13.24□□□□□ -0.29
CDH11-201ENST00000268603 CHI3L1P36222 383 aaPredicted RBP13.24□□□□□ -0.29
CDH11-201ENST00000268603 SFSWAPQ12872 951 aaKnown RBP13.24□□□□□ -0.29
CDH11-201ENST00000268603 TAF1CQ15572 869 aaPredicted RBP13.24□□□□□ -0.29
CDH11-201ENST00000268603 BRIP1Q9BX63 1249 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 FOXP1Q9H334 677 aaPredicted RBP13.24□□□□□ -0.29
CDH11-201ENST00000268603 SOWAHDA6NJG2 315 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 MYO1CO00159 1063 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 POLR3AO14802 1390 aaPredicted RBP13.24□□□□□ -0.29
CDH11-201ENST00000268603 PGK2P07205 417 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 ENO2P09104 434 aaPredicted RBP13.24□□□□□ -0.29
CDH11-201ENST00000268603 RARBP10826 455 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 CDH6P55285 790 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 NR1H3Q13133 447 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 KRT31Q15323 416 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 ZNF713Q8N859 430 aaPredicted RBP13.24□□□□□ -0.29
CDH11-201ENST00000268603 NSUN6Q8TEA1 469 aaKnown RBP13.24□□□□□ -0.29
CDH11-201ENST00000268603 OXCT2Q9BYC2 517 aaPredicted RBP13.24□□□□□ -0.29
CDH11-201ENST00000268603 CFAP99D6REC4 459 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 hCG_1984214I3L0E3 225 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 PODXLO00592 558 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 PCCAP05165 728 aaPredicted RBP13.24□□□□□ -0.29
CDH11-201ENST00000268603 GPC1P35052 558 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 KPNA1P52294 538 aaPredicted RBP13.24□□□□□ -0.29
CDH11-201ENST00000268603 TMEM154Q6P9G4 183 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 SARM1Q6SZW1 724 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 CCDC3Q9BQI4 270 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 LRRC14BA6NHZ5 514 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 C16orf96A6NNT2 1141 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 SERPINB3P29508 390 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 ERFP50548 548 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 ARFIP2P53365 341 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 RAD23BP54727 409 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 CNTN1Q12860 1018 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 MIIPQ5JXC2 388 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 TNIP3Q96KP6 325 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 RNF146Q9NTX7 359 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 NRBP1Q9UHY1 535 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 SYNCRIPO60506 623 aaKnown RBP13.24□□□□□ -0.29
CDH11-201ENST00000268603 HOXB7P09629 217 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 CYP19A1P11511 503 aaPredicted RBP13.24□□□□□ -0.29
CDH11-201ENST00000268603 SERPINB1P30740 379 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 OLFML2BQ68BL8 750 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 CLYBLQ8N0X4 340 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 POLD4Q9HCU8 107 aa13.24□□□□□ -0.29
CDH11-201ENST00000268603 C19orf60Q96EN9 201 aa13.23□□□□□ -0.29
CDH11-201ENST00000268603 TBC1D23Q9NUY8 699 aa13.23□□□□□ -0.29
CDH11-201ENST00000268603 MAN1B1Q9UKM7 699 aa13.23□□□□□ -0.29
CDH11-201ENST00000268603 E2F8A0AVK6 867 aa13.23□□□□□ -0.29
CDH11-201ENST00000268603 TBXAS1P24557 533 aaPredicted RBP13.23□□□□□ -0.29
CDH11-201ENST00000268603 RGS2P41220 211 aa13.23□□□□□ -0.29
CDH11-201ENST00000268603 CDK8P49336 464 aa13.23□□□□□ -0.29
CDH11-201ENST00000268603 RPS6P62753 249 aaKnown RBP13.23□□□□□ -0.29
CDH11-201ENST00000268603 TMEM62Q0P6H9 643 aa13.23□□□□□ -0.29
CDH11-201ENST00000268603 MTFR1Q15390 333 aa13.23□□□□□ -0.29
CDH11-201ENST00000268603 PADI6Q6TGC4 694 aa13.23□□□□□ -0.29
CDH11-201ENST00000268603 ELP3Q9H9T3 547 aa13.23□□□□□ -0.29
CDH11-201ENST00000268603 HDAC6Q9UBN7 1215 aa13.23□□□□□ -0.29
CDH11-201ENST00000268603 ATP10DQ9P241 1426 aa13.23□□□□□ -0.29
CDH11-201ENST00000268603 GPC5P78333 572 aa13.23□□□□□ -0.29
CDH11-201ENST00000268603 SCRN1Q12765 414 aa13.23□□□□□ -0.29
CDH11-201ENST00000268603 UXS1Q8NBZ7 420 aa13.23□□□□□ -0.29
CDH11-201ENST00000268603 KIAA0556O60303 1618 aa13.23□□□□□ -0.29
CDH11-201ENST00000268603 DUOX2Q9NRD8 1548 aa13.23□□□□□ -0.29
CDH11-201ENST00000268603 RNASEH1O60930 286 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms