RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 PSMC6P62333 389 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 TMEM132DQ14C87 1099 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 MMEL1Q495T6 779 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 FAM47EQ6ZV65 393 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 HDAC11Q96DB2 347 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 TRAF3IP3Q9Y228 551 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 PI4K2BG5E9Z4 385 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 SPDYE2Q495Y8 402 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 CRLF3Q8IUI8 442 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 DHX35Q9H5Z1 703 aaKnown RBP17.7■□□□□ 0.42
PHRF1-201ENST00000264555 GAS2O43903 313 aaKnown RBP17.7■□□□□ 0.42
PHRF1-201ENST00000264555 HBP1O60381 514 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 LUC7L3O95232 432 aaKnown RBP17.7■□□□□ 0.42
PHRF1-201ENST00000264555 KIAA1841Q6NSI8 718 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 C4orf19Q8IY42 314 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 NUDCD1Q96RS6 583 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 PI4K2AQ9BTU6 479 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 NIF3L1Q9GZT8 377 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 GPRC5CQ9NQ84 441 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 KDM4FA0A1W2PPD8 638 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 TMPRSS15P98073 1019 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 PDCD7Q8N8D1 485 aaKnown RBP17.7■□□□□ 0.42
PHRF1-201ENST00000264555 MAML1Q92585 1016 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 TRIM56Q9BRZ2 755 aaKnown RBP17.7■□□□□ 0.42
PHRF1-201ENST00000264555 KCND1Q9NSA2 647 aa17.7■□□□□ 0.42
PHRF1-201ENST00000264555 PRMT7Q9NVM4 692 aaPredicted RBP17.7■□□□□ 0.42
PHRF1-201ENST00000264555 ANKRD65E5RJM6 399 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 FGRP09769 529 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 ESRRAP11474 423 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-201ENST00000264555 EIF3EP60228 445 aaKnown RBP17.69■□□□□ 0.42
PHRF1-201ENST00000264555 TSPY1Q01534 308 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 SEPT6Q14141 434 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 HIF1AQ16665 826 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 EFHC2Q5JST6 749 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 SPOPLQ6IQ16 392 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 ACAD10Q6JQN1 1059 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 MCEEQ96PE7 176 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 AGO4Q9HCK5 861 aaKnown RBP17.69■□□□□ 0.42
PHRF1-201ENST00000264555 DBR1Q9UK59 544 aaKnown RBP17.69■□□□□ 0.42
PHRF1-201ENST00000264555 ATMINO43313 823 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-201ENST00000264555 NPTX2P47972 431 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 HP1BP3Q5SSJ5 553 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-201ENST00000264555 ZNF507Q8TCN5 953 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 SCFD2Q8WU76 684 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 MRIQ9BWK5 157 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 ERAP1Q9NZ08 941 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 ABT1Q9ULW3 272 aaKnown RBP17.69■□□□□ 0.42
PHRF1-201ENST00000264555 FAM86B1E9PN63 330 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 VIL1P09327 827 aaKnown RBP17.69■□□□□ 0.42
PHRF1-201ENST00000264555 FAM86B2P0C5J1 330 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 SH2D3CQ8N5H7 860 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 FBXO41Q8TF61 875 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 CBWD1Q9BRT8 395 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-201ENST00000264555 NFIBO00712 420 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 APOL1O14791 398 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 CREB3O43889 395 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 ATP5HO75947 161 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 SERPINB6P35237 376 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 HSPA9P38646 679 aaKnown RBP17.69■□□□□ 0.42
PHRF1-201ENST00000264555 GRIK5Q16478 980 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 CBWD2Q8IUF1 395 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 SYTL5Q8TDW5 730 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-201ENST00000264555 MICAL1Q8TDZ2 1067 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 RIN2Q8WYP3 895 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-201ENST00000264555 TGS1Q96RS0 853 aaKnown RBP17.69■□□□□ 0.42
PHRF1-201ENST00000264555 OSBPL8Q9BZF1 889 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 SPON1Q9HCB6 807 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 SENP1Q9P0U3 644 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 SYNPO2Q9UMS6 1093 aa17.69■□□□□ 0.42
PHRF1-201ENST00000264555 VCAM1P19320 739 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 R3HDM1Q15032 1099 aaKnown RBP17.68■□□□□ 0.42
PHRF1-201ENST00000264555 ZNF449Q6P9G9 518 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 TBC1D1Q86TI0 1168 aaPredicted RBP17.68■□□□□ 0.42
PHRF1-201ENST00000264555 PPM1NQ8N819 430 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 FUT8Q9BYC5 575 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 MLXIPLQ9NP71 852 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 KLHL11Q9NVR0 708 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 GARTP22102 1010 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 CXCL9Q07325 125 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 AGBL2Q5U5Z8 902 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 C1orf228Q6PIY5 440 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 ZIM3Q96PE6 472 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 NUDT12Q9BQG2 462 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 EPN3Q9H201 632 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 PXMP2Q9NR77 195 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 PSD3Q9NYI0 1048 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 CDR2Q01850 454 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 NBPF9Q3BBW0 867 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 DHX38Q92620 1227 aaKnown RBP17.68■□□□□ 0.42
PHRF1-201ENST00000264555 MKL1Q969V6 931 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 FOXP3Q9BZS1 431 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 INPP5FQ9Y2H2 1132 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 A0A0G2JND7 137 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 SPDYE16A6NNV3 312 aaPredicted RBP17.68■□□□□ 0.42
PHRF1-201ENST00000264555 TCF7P36402 384 aaPredicted RBP17.68■□□□□ 0.42
PHRF1-201ENST00000264555 TGFB2P61812 414 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 DBN1Q16643 649 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 P3H1Q32P28 736 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 EFCAB12Q6NXP0 572 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms