RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 BTNL9Q6UXG8 535 aa13.21□□□□□ -0.3
CHMP3-201ENST00000263856 KIFAP3Q92845 792 aa13.21□□□□□ -0.3
CHMP3-201ENST00000263856 IFT74Q96LB3 600 aa13.21□□□□□ -0.3
CHMP3-201ENST00000263856 PLCD4Q9BRC7 762 aa13.21□□□□□ -0.3
CHMP3-201ENST00000263856 SAYSD1Q9NPB0 183 aa13.21□□□□□ -0.3
CHMP3-201ENST00000263856 NOP53Q9NZM5 478 aaKnown RBP13.21□□□□□ -0.3
CHMP3-201ENST00000263856 GTF3C4Q9UKN8 822 aa13.21□□□□□ -0.3
CHMP3-201ENST00000263856 EXOC1LA0A1B0GW35 172 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 TESPA1A2RU30 521 aaPredicted RBP13.2□□□□□ -0.3
CHMP3-201ENST00000263856 CFAP73A6NFT4 308 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 GSTA1P08263 222 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 ZSCAN5DPP0CG00 497 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 KRT10P13645 584 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 HOXA10P31260 410 aaPredicted RBP13.2□□□□□ -0.3
CHMP3-201ENST00000263856 SPOPLQ6IQ16 392 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 GMCL1P1Q8NEA9 526 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 ERP27Q96DN0 273 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 SLCO1B3Q9NPD5 702 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 DONSONQ9NYP3 566 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 MRPL11Q9Y3B7 192 aaKnown RBP13.2□□□□□ -0.3
CHMP3-201ENST00000263856 NRAPQ86VF7 1730 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 DENND3A2RUS2 1198 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 NFIBO00712 420 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 YWHABP31946 246 aaKnown RBP13.2□□□□□ -0.3
CHMP3-201ENST00000263856 MSH2P43246 934 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 RARRES1P49788 294 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 DGKZQ13574 1117 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 UGCGQ16739 394 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 KRT39Q6A163 491 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 CDAN1Q8IWY9 1227 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 FAM71AQ8IYT1 594 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 FAM213AQ9BRX8 229 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 TNNI1P19237 187 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 RFX1P22670 979 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 SESN3P58005 492 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 CDR2Q01850 454 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 P3H1Q32P28 736 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 TATDN1Q6P1N9 297 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 ARHGEF18Q6ZSZ5 1173 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 SERPINB12Q96P63 405 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 CCDC77Q9BR77 488 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 HAO1Q9UJM8 370 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 C15orf41Q9Y2V0 281 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHMP3-201ENST00000263856 UTRNP46939 3433 aa13.2□□□□□ -0.3
CHMP3-201ENST00000263856 UBE4BO95155 1302 aa13.19□□□□□ -0.3
CHMP3-201ENST00000263856 HNRNPDLO14979 420 aaKnown RBP13.19□□□□□ -0.3
CHMP3-201ENST00000263856 PLS3P13797 630 aa13.19□□□□□ -0.3
CHMP3-201ENST00000263856 ETS1P14921 441 aa13.19□□□□□ -0.3
CHMP3-201ENST00000263856 PSMC4P43686 418 aa13.19□□□□□ -0.3
CHMP3-201ENST00000263856 NSFP46459 744 aaKnown RBP13.19□□□□□ -0.3
CHMP3-201ENST00000263856 ATP13A4Q4VNC1 1196 aa13.19□□□□□ -0.3
CHMP3-201ENST00000263856 FBF1Q8TES7 1133 aa13.19□□□□□ -0.3
CHMP3-201ENST00000263856 CD101Q93033 1021 aa13.19□□□□□ -0.3
CHMP3-201ENST00000263856 RBM15Q96T37 977 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHMP3-201ENST00000263856 ROPN1BQ9BZX4 212 aaPredicted RBP13.19□□□□□ -0.3
CHMP3-201ENST00000263856 ROPN1Q9HAT0 212 aaPredicted RBP13.19□□□□□ -0.3
CHMP3-201ENST00000263856 TMOD2Q9NZR1 351 aa13.19□□□□□ -0.3
CHMP3-201ENST00000263856 ZNF148Q9UQR1 794 aa13.19□□□□□ -0.3
CHMP3-201ENST00000263856 BANF1O75531 89 aa13.19□□□□□ -0.3
CHMP3-201ENST00000263856 P4HBP07237 508 aaKnown RBP13.19□□□□□ -0.3
CHMP3-201ENST00000263856 MYBL1P10243 752 aa13.19□□□□□ -0.3
CHMP3-201ENST00000263856 ITIH2P19823 946 aa13.19□□□□□ -0.3
CHMP3-201ENST00000263856 FBXL13Q8NEE6 735 aa13.19□□□□□ -0.3
CHMP3-201ENST00000263856 MXRA8Q9BRK3 442 aa13.19□□□□□ -0.3
CHMP3-201ENST00000263856 ALG13Q9NP73 1137 aaKnown RBP13.19□□□□□ -0.3
CHMP3-201ENST00000263856 RAB20Q9NX57 234 aa13.19□□□□□ -0.3
CHMP3-201ENST00000263856 GZMAP12544 262 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 CNGA1P29973 690 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 QARSP47897 775 aaKnown RBP13.18□□□□□ -0.3
CHMP3-201ENST00000263856 SETDB1Q15047 1291 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 ACAD10Q6JQN1 1059 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 CKAP2Q8WWK9 683 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 SPDL1Q96EA4 605 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 KMT5AQ9NQR1 393 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 UVRAGQ9P2Y5 699 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 ATP8B3O60423 1300 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 GOLGA8RI6L899 631 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 CFHP08603 1231 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 NEFHP12036 1026 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 GCKP35557 465 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 ERFP50548 548 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 DYNLT1P63172 113 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 STRN3Q13033 797 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 SEPT7Q16181 437 aaKnown RBP13.18□□□□□ -0.3
CHMP3-201ENST00000263856 ANKMY2Q8IV38 441 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 SPIRE2Q8WWL2 714 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 TRAIPQ9BWF2 469 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 DCLK3Q9C098 648 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 LRRC19Q9H756 370 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 C1orf112Q9NSG2 853 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 WHRNQ9P202 907 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 COL20A1Q9P218 1284 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 CYP1A2P05177 515 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 VIL1P09327 827 aaKnown RBP13.18□□□□□ -0.3
CHMP3-201ENST00000263856 CA4P22748 312 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 FOXN2P32314 431 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 IL9RQ01113 521 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 MGAT5Q09328 741 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 MTMR1Q13613 665 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms