RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 A0A1W2PQY0 241 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 LACTBL1A8MY62 500 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 SLC10A6Q3KNW5 377 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 FAM228AQ86W67 206 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 PPM1KQ8N3J5 372 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 SLC43A3Q8NBI5 491 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 KAT5Q92993 513 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 PI4K2AQ9BTU6 479 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 DEF6Q9H4E7 631 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 ASB7Q9H672 318 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 HAUS4Q9H6D7 363 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.69■■□□□ 1.542e-9■■■■■ 167.7
SMARCB1-201ENST00000263121 NOC2LQ9Y3T9 749 aaKnown RBP24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 MROH7Q68CQ1 1323 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 ZNF263O14978 683 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 EVI5O60447 810 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 GFPT2O94808 682 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 CHRNA1P02708 482 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 MFAP3P55082 362 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 C1QTNF8P60827 252 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 KRT83P78385 493 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 GCNT1Q02742 428 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 PTK7Q13308 1070 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 TRAPPC11Q7Z392 1133 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 TATDN2Q93075 761 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 ACAP3Q96P50 834 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 EIF2AQ9BY44 585 aaKnown RBP24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 PAK6Q9NQU5 681 aaPredicted RBP24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 PHF24Q9UPV7 400 aa24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 PIN4Q9Y237 131 aaKnown RBP24.69■■□□□ 1.54
SMARCB1-201ENST00000263121 FOXN3O00409 490 aaPredicted RBP24.68■■□□□ 1.54
SMARCB1-201ENST00000263121 AKR1B10O60218 316 aa24.68■■□□□ 1.54
SMARCB1-201ENST00000263121 PTK2Q05397 1052 aa24.68■■□□□ 1.54
SMARCB1-201ENST00000263121 NCOA4Q13772 614 aa24.68■■□□□ 1.54
SMARCB1-201ENST00000263121 PTPN14Q15678 1187 aa24.68■■□□□ 1.54
SMARCB1-201ENST00000263121 WDR44Q5JSH3 913 aa24.68■■□□□ 1.54
SMARCB1-201ENST00000263121 FAM81BQ96LP2 452 aa24.68■■□□□ 1.54
SMARCB1-201ENST00000263121 C1orf112Q9NSG2 853 aa24.68■■□□□ 1.54
SMARCB1-201ENST00000263121 TRMT13Q9NUP7 481 aaKnown RBP24.68■■□□□ 1.54
SMARCB1-201ENST00000263121 RALGAPA2Q2PPJ7 1873 aa24.67■■□□□ 1.54
SMARCB1-201ENST00000263121 A0A0U1RQJ8 604 aa24.67■■□□□ 1.54
SMARCB1-201ENST00000263121 RBAK-RBAKDNI3L0D1 243 aa24.67■■□□□ 1.54
SMARCB1-201ENST00000263121 PHACTR2O75167 634 aa24.67■■□□□ 1.54
SMARCB1-201ENST00000263121 TMEM191BP0C7N4 346 aa24.67■■□□□ 1.54
SMARCB1-201ENST00000263121 TFAMQ00059 246 aaKnown RBP24.67■■□□□ 1.54
SMARCB1-201ENST00000263121 TRIM71Q2Q1W2 868 aaKnown RBP24.67■■□□□ 1.54
SMARCB1-201ENST00000263121 ENOSF1Q7L5Y1 443 aa24.67■■□□□ 1.54
SMARCB1-201ENST00000263121 ATRIPQ8WXE1 791 aa24.67■■□□□ 1.54
SMARCB1-201ENST00000263121 SHC3Q92529 594 aa24.67■■□□□ 1.54
SMARCB1-201ENST00000263121 DHX38Q92620 1227 aaKnown RBP24.67■■□□□ 1.54
SMARCB1-201ENST00000263121 ANKRD36BP1Q96IX9 119 aa24.67■■□□□ 1.54
SMARCB1-201ENST00000263121 CCDC94Q9BW85 323 aaPredicted RBP24.67■■□□□ 1.54
SMARCB1-201ENST00000263121 IPO7O95373 1038 aaKnown RBP24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 NFICP08651 508 aa24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 CTSHP09668 335 aa24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 ANXA13P27216 316 aa24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 UBXN11Q5T124 520 aa24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 JADE1Q6IE81 842 aa24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 ZNF571Q7Z3V5 609 aaPredicted RBP24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 ELMO3Q96BJ8 720 aa24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 KBTBD13C9JR72 458 aa24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 TNNC2P02585 160 aa24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 CCDC172P0C7W6 258 aa24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 THPOP40225 353 aa24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 SPA17Q15506 151 aa24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 SCARA3Q6AZY7 606 aa24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 ZNF662Q6ZS27 426 aa24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 CD302Q8IX05 232 aa24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 FAM71AQ8IYT1 594 aa24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 APOBEC3GQ9HC16 384 aaKnown RBP24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 STARD7Q9NQZ5 370 aa24.66■■□□□ 1.54
SMARCB1-201ENST00000263121 A0A0U1RQG5 324 aaPredicted RBP24.65■■□□□ 1.54
SMARCB1-201ENST00000263121 OFD1O75665 1012 aa24.65■■□□□ 1.54
SMARCB1-201ENST00000263121 ASS1P00966 412 aaKnown RBP24.65■■□□□ 1.54
SMARCB1-201ENST00000263121 CST3P01034 146 aaPredicted RBP24.65■■□□□ 1.54
SMARCB1-201ENST00000263121 TNNT1P13805 278 aa24.65■■□□□ 1.54
SMARCB1-201ENST00000263121 ARHGAP25P42331 645 aa24.65■■□□□ 1.54
SMARCB1-201ENST00000263121 CYP27A1Q02318 531 aa24.65■■□□□ 1.54
SMARCB1-201ENST00000263121 GFPT1Q06210 699 aaPredicted RBP24.65■■□□□ 1.54
SMARCB1-201ENST00000263121 SLC18A3Q16572 532 aa24.65■■□□□ 1.54
SMARCB1-201ENST00000263121 DNAJC5GQ8N7S2 189 aa24.65■■□□□ 1.54
SMARCB1-201ENST00000263121 SYT11Q9BT88 431 aa24.65■■□□□ 1.54
SMARCB1-201ENST00000263121 PLEKHA5Q9HAU0 1116 aa24.65■■□□□ 1.54
SMARCB1-201ENST00000263121 SNTG2Q9NY99 539 aa24.65■■□□□ 1.54
SMARCB1-201ENST00000263121 NOD1Q9Y239 953 aa24.65■■□□□ 1.54
SMARCB1-201ENST00000263121 C2CD2Q9Y426 696 aa24.65■■□□□ 1.54
SMARCB1-201ENST00000263121 CITO14578 2027 aa24.64■■□□□ 1.54
SMARCB1-201ENST00000263121 KIF2AO00139 706 aaPredicted RBP24.64■■□□□ 1.53
SMARCB1-201ENST00000263121 DNM1LO00429 736 aa24.64■■□□□ 1.53
SMARCB1-201ENST00000263121 RPS6KA5O75582 802 aa24.64■■□□□ 1.53
SMARCB1-201ENST00000263121 NOP14P78316 857 aaKnown RBP24.64■■□□□ 1.53
SMARCB1-201ENST00000263121 MTFR1Q15390 333 aa24.64■■□□□ 1.53
SMARCB1-201ENST00000263121 FAM26DQ5JW98 314 aa24.64■■□□□ 1.53
SMARCB1-201ENST00000263121 SPOPLQ6IQ16 392 aa24.64■■□□□ 1.53
SMARCB1-201ENST00000263121 NT5DC4Q86YG4 428 aa24.64■■□□□ 1.53
SMARCB1-201ENST00000263121 OLIG1Q8TAK6 271 aa24.64■■□□□ 1.53
SMARCB1-201ENST00000263121 TRIM6Q9C030 488 aaPredicted RBP24.64■■□□□ 1.53
SMARCB1-201ENST00000263121 NXF3Q9H4D5 531 aaKnown RBP24.64■■□□□ 1.53
SMARCB1-201ENST00000263121 A0A087X0T9 212 aa24.63■■□□□ 1.53
SMARCB1-201ENST00000263121 CAND2O75155 1236 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms