RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 PCSK9Q8NBP7 692 aaKnown RBP16.72■□□□□ 0.27
SHANK3-201ENST00000262795 JADE3Q92613 823 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 RUNDC3BQ96NL0 473 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 GTPBP10A4D1E9 387 aaKnown RBP16.72■□□□□ 0.27
SHANK3-201ENST00000262795 APOL1O14791 398 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 TSPAN3O60637 253 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 RALBP11234 206 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 CCDC15Q0P6D6 951 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 CCDC33Q8N5R6 958 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 SENP2Q9HC62 589 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 SLC30A1Q9Y6M5 507 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 ZCCHC11Q5TAX3 1644 aaKnown RBP16.72■□□□□ 0.27
SHANK3-201ENST00000262795 SEMA3FQ13275 785 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 PALB2Q86YC2 1186 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 CCDC51Q96ER9 411 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 EMSYQ7Z589 1322 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 CALB1P05937 261 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 ODC1P11926 461 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 ZNF211Q13398 564 aaPredicted RBP16.71■□□□□ 0.27
SHANK3-201ENST00000262795 SLC35F6Q8N357 371 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 CLMNQ96JQ2 1002 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.71■□□□□ 0.27
SHANK3-201ENST00000262795 AATKQ6ZMQ8 1374 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 SOWAHDA6NJG2 315 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 H7C4K7 107 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 RASGRF2O14827 1237 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 COPS2P61201 443 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 NAALADL2Q58DX5 795 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 CPA5Q8WXQ8 436 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 PPP1R9AQ9ULJ8 1098 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 HECW2Q9P2P5 1572 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 PHLPP2Q6ZVD8 1323 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 GFAPP14136 432 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 TBXAS1P24557 533 aaPredicted RBP16.71■□□□□ 0.27
SHANK3-201ENST00000262795 RBP5P82980 135 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 PPP1R18Q6NYC8 613 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 GTF3C2Q8WUA4 911 aaPredicted RBP16.71■□□□□ 0.27
SHANK3-201ENST00000262795 GSDMAQ96QA5 445 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 TAAR1Q96RJ0 339 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 H7C1W4 665 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 NDUFS3O75489 264 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 HMOX2P30519 316 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 PTGISQ16647 500 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 THG1LQ9NWX6 298 aaKnown RBP16.71■□□□□ 0.27
SHANK3-201ENST00000262795 APPL1Q9UKG1 709 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 PPP6R2O75170 966 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 WEE2P0C1S8 567 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 SESN2P58004 480 aaPredicted RBP16.71■□□□□ 0.27
SHANK3-201ENST00000262795 KIFC3Q9BVG8 833 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 CINPQ9BW66 212 aaPredicted RBP16.71■□□□□ 0.27
SHANK3-201ENST00000262795 TRPV6Q9H1D0 765 aa16.71■□□□□ 0.27
SHANK3-201ENST00000262795 CD2BP2O95400 341 aaKnown RBP16.71■□□□□ 0.26
SHANK3-201ENST00000262795 RWDD2BP57060 319 aa16.71■□□□□ 0.26
SHANK3-201ENST00000262795 FBXO32Q969P5 355 aa16.71■□□□□ 0.26
SHANK3-201ENST00000262795 HES6Q96HZ4 224 aa16.71■□□□□ 0.26
SHANK3-201ENST00000262795 XPNPEP3Q9NQH7 507 aa16.71■□□□□ 0.26
SHANK3-201ENST00000262795 KCNN4O15554 427 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 KIF23Q02241 960 aaPredicted RBP16.7■□□□□ 0.26
SHANK3-201ENST00000262795 CES5AQ6NT32 575 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 PDIK1LQ8N165 341 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 SLC30A5Q8TAD4 765 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 ELMO2Q96JJ3 720 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 POLR3CQ9BUI4 534 aaPredicted RBP16.7■□□□□ 0.26
SHANK3-201ENST00000262795 ATXN3LQ9H3M9 355 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 SMYD3Q9H7B4 428 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 SRPRBQ9Y5M8 271 aaKnown RBP16.7■□□□□ 0.26
SHANK3-201ENST00000262795 hCG_2014768A0A024R1R8 64 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 TEX33O43247 280 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 SPAG7O75391 227 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 NR3C2P08235 984 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 SMARCA1P28370 1054 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 BTKQ06187 659 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 ITPK1Q13572 414 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 LAMC2Q13753 1193 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 SCFD2Q8WU76 684 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 MAGED4Q96JG8 741 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 PLA2G4CQ9UP65 541 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 CTNNB1P35222 781 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 PFKFB3Q16875 520 aaPredicted RBP16.7■□□□□ 0.26
SHANK3-201ENST00000262795 INTS9Q9NV88 658 aaKnown RBP16.7■□□□□ 0.26
SHANK3-201ENST00000262795 ADAMTS1Q9UHI8 967 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 MTMR6Q9Y217 621 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 C5orf58C9J3I9 102 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 FGFR4P22455 802 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 SPATS2Q86XZ4 545 aaKnown RBP16.7■□□□□ 0.26
SHANK3-201ENST00000262795 CCDC3Q9BQI4 270 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 INTS2Q9H0H0 1204 aaKnown RBP16.7■□□□□ 0.26
SHANK3-201ENST00000262795 SYNGAP1Q96PV0 1343 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 ERVK-7P63135 1459 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 PPP1R2P3Q6NXS1 205 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 PPP1R14AQ96A00 147 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 CAPN11Q9UMQ6 739 aa16.7■□□□□ 0.26
SHANK3-201ENST00000262795 RPS12P25398 132 aaKnown RBP16.69■□□□□ 0.26
SHANK3-201ENST00000262795 HIF1AQ16665 826 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 PHLDB3Q6NSJ2 640 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 DOK6Q6PKX4 331 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 LPAR1Q92633 364 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 EMILIN2Q9BXX0 1053 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 ADAM33Q9BZ11 813 aa16.69■□□□□ 0.26
SHANK3-201ENST00000262795 KDM4CQ9H3R0 1056 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms