RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 ZNF280DQ6N043 979 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 PDXDC1Q6P996 788 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 RNF10Q8N5U6 811 aaKnown RBP14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 CFAP99D6REC4 459 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 SMIM24O75264 130 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 CYP2C19P33261 490 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 MST1RQ04912 1400 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 IKBKEQ14164 716 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 LLGL1Q15334 1064 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 HABP4Q5JVS0 413 aaKnown RBP14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 CLEC10AQ8IUN9 316 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 KCTD17Q8N5Z5 321 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 DNERQ8NFT8 737 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 KCNH7Q9NS40 1196 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 PDXKO00764 312 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 KRT37O76014 449 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 VCLP18206 1134 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 VCAM1P19320 739 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 INPP1P49441 399 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 GOLGA7BQ2TAP0 167 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 SPATC1LQ9H0A9 340 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 DPP3Q9NY33 737 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 SLC26A2P50443 739 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 ZNF177Q13360 481 aaPredicted RBP14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 DRAP1Q14919 205 aaPredicted RBP14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 KRT31Q15323 416 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 ANKRD20A4Q4UJ75 823 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 ANKRD20A8PQ5CZ79 823 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 ANKRD20A2Q5SQ80 823 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 ANKRD20A1Q5TYW2 823 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 OR6P1Q8NGX9 317 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 RABGGTAQ92696 567 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 TRPM5Q9NZQ8 1165 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 HNRNPCL2B2RXH8 293 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 HNRNPCL1O60812 293 aaKnown RBP14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 MYL4P12829 197 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 MX2P20592 715 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 NMT1P30419 496 aaKnown RBP14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 DEUP1Q05D60 604 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 RABGAP1LQ5R372 815 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 CES5AQ6NT32 575 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 GMCL1P1Q8NEA9 526 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 DPF2Q92785 391 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 CDK5RAP1Q96SZ6 601 aaKnown RBP14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 JMJD4Q9H9V9 463 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 BFARQ9NZS9 450 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 TOB2Q14106 344 aaPredicted RBP14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 ELF2Q15723 593 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 IRAK1BP1Q5VVH5 260 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 ACRBPQ8NEB7 543 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 PPP1R13BQ96KQ4 1090 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 VTA1Q9NP79 307 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 G3BP2Q9UN86 482 aaKnown RBP14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 NPHP3-ACAD11A0A0J9YXS1 232 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 F5H423 210 aaPredicted RBP14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 MGEA5O60502 916 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 ARHGDIAP52565 204 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 CDH6P55285 790 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 MFSD10Q14728 455 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 POLD3Q15054 466 aaPredicted RBP14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 LRRC8AQ8IWT6 810 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 SPDL1Q96EA4 605 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 KDM4CQ9H3R0 1056 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 CASS4Q9NQ75 786 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 PPP1R9AQ9ULJ8 1098 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 NFU1Q9UMS0 254 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 PXDNLA1KZ92 1463 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 PPP4CP60510 307 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 PHLDB3Q6NSJ2 640 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 C18orf8Q96DM3 657 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 CINPQ9BW66 212 aaPredicted RBP14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 NEUROG2Q9H2A3 272 aa14.34□□□□□ -0.11
PDGFRB-201ENST00000261799 PIK3R2O00459 728 aa14.33□□□□□ -0.11
PDGFRB-201ENST00000261799 U2AF2P26368 475 aaKnown RBP eCLIP14.33□□□□□ -0.11
PDGFRB-201ENST00000261799 RGS7P49802 495 aa14.33□□□□□ -0.11
PDGFRB-201ENST00000261799 PPM1LQ5SGD2 360 aa14.33□□□□□ -0.11
PDGFRB-201ENST00000261799 GDAP1L1Q96MZ0 367 aa14.33□□□□□ -0.11
PDGFRB-201ENST00000261799 EHD4Q9H223 541 aa14.33□□□□□ -0.11
PDGFRB-201ENST00000261799 SLC30A1Q9Y6M5 507 aa14.33□□□□□ -0.11
PDGFRB-201ENST00000261799 MROH7Q68CQ1 1323 aa14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 DSG3P32926 999 aa14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 EFHC1Q5JVL4 640 aa14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 NCLNQ969V3 563 aa14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 SPTLC3Q9NUV7 552 aa14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 KLK14Q9P0G3 267 aa14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 KRT38O76015 456 aa14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 MYBP10242 640 aa14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 CREMQ03060 361 aa14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 KCNA1Q09470 495 aa14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 ART3Q13508 389 aa14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 RHOT1Q8IXI2 618 aa14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 RIN2Q8WYP3 895 aaPredicted RBP14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 MAP3K14Q99558 947 aa14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 TMEM63CQ9P1W3 806 aa14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 SF3A3Q12874 501 aaKnown RBP eCLIP14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 GLE1Q53GS7 698 aaKnown RBP14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 TLK2Q86UE8 772 aa14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 USP13Q92995 863 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms