RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 AGO4Q9HCK5 861 aaKnown RBP20.64■□□□□ 0.9
SCARB1-201ENST00000261693 TBX20Q9UMR3 447 aa20.64■□□□□ 0.9
SCARB1-201ENST00000261693 MROH7Q68CQ1 1323 aa20.64■□□□□ 0.89
SCARB1-201ENST00000261693 IGF2BP3O00425 579 aaKnown RBP eCLIP20.64■□□□□ 0.893e-8■■■□□ 18.8
SCARB1-201ENST00000261693 ATF2P15336 505 aa20.64■□□□□ 0.89
SCARB1-201ENST00000261693 XKR9Q5GH70 373 aa20.64■□□□□ 0.89
SCARB1-201ENST00000261693 CPXCR1Q8N123 301 aa20.64■□□□□ 0.89
SCARB1-201ENST00000261693 SLCO2A1Q92959 643 aa20.64■□□□□ 0.89
SCARB1-201ENST00000261693 TMEM8AQ9HCN3 771 aa20.64■□□□□ 0.89
SCARB1-201ENST00000261693 NINJ2Q9NZG7 142 aa20.64■□□□□ 0.89
SCARB1-201ENST00000261693 ASTN2O75129 1339 aaPredicted RBP20.64■□□□□ 0.89
SCARB1-201ENST00000261693 NQO1P15559 274 aaKnown RBP20.63■□□□□ 0.89
SCARB1-201ENST00000261693 SSTR3P32745 418 aaPredicted RBP20.63■□□□□ 0.89
SCARB1-201ENST00000261693 MTMR1Q13613 665 aa20.63■□□□□ 0.89
SCARB1-201ENST00000261693 TMEM174Q8WUU8 243 aa20.63■□□□□ 0.89
SCARB1-201ENST00000261693 PRCCQ92733 491 aaPredicted RBP20.63■□□□□ 0.89
SCARB1-201ENST00000261693 C9orf72Q96LT7 481 aa20.63■□□□□ 0.89
SCARB1-201ENST00000261693 TGS1Q96RS0 853 aaKnown RBP20.63■□□□□ 0.89
SCARB1-201ENST00000261693 DCLK3Q9C098 648 aa20.63■□□□□ 0.89
SCARB1-201ENST00000261693 TRIM33Q9UPN9 1127 aa20.63■□□□□ 0.89
SCARB1-201ENST00000261693 MAPK13O15264 365 aa20.63■□□□□ 0.89
SCARB1-201ENST00000261693 GJC1P36383 396 aa20.63■□□□□ 0.89
SCARB1-201ENST00000261693 GPC3P51654 580 aa20.63■□□□□ 0.89
SCARB1-201ENST00000261693 MRPS9P82933 396 aaKnown RBP20.63■□□□□ 0.89
SCARB1-201ENST00000261693 PTK6Q13882 451 aa20.63■□□□□ 0.89
SCARB1-201ENST00000261693 MEX3CQ5U5Q3 659 aaKnown RBP20.63■□□□□ 0.89
SCARB1-201ENST00000261693 SV2AQ7L0J3 742 aa20.63■□□□□ 0.89
SCARB1-201ENST00000261693 SPATA21Q7Z572 469 aa20.63■□□□□ 0.89
SCARB1-201ENST00000261693 KIRREL3Q8IZU9 778 aa20.63■□□□□ 0.89
SCARB1-201ENST00000261693 SYNPO2Q9UMS6 1093 aa20.63■□□□□ 0.89
SCARB1-201ENST00000261693 DENND3A2RUS2 1198 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 CFAP73A6NFT4 308 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 A8MUI8 341 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 C21orf2O43822 256 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 GAS8O95995 478 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 RALAP11233 206 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 EIF2AK2P19525 551 aaKnown RBP20.62■□□□□ 0.89
SCARB1-201ENST00000261693 ATP5DP30049 168 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 STX2P32856 288 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 ALDH5A1P51649 535 aaPredicted RBP20.62■□□□□ 0.89
SCARB1-201ENST00000261693 HSD17B4P51659 736 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 NCKAP1LP55160 1127 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 RPAINQ86UA6 219 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 CKAP2Q8WWK9 683 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 TACO1Q9BSH4 297 aaKnown RBP20.62■□□□□ 0.89
SCARB1-201ENST00000261693 VEZTQ9HBM0 779 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 STK38LQ9Y2H1 464 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 USP20Q9Y2K6 914 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 PMM2O15305 246 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 NPTX2P47972 431 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 LMBRD2Q68DH5 695 aaPredicted RBP20.62■□□□□ 0.89
SCARB1-201ENST00000261693 FITM2Q8N6M3 262 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 TMEM161BQ8NDZ6 487 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 RMDN2Q96LZ7 410 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 TRAIPQ9BWF2 469 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 TMOD2Q9NZR1 351 aa20.62■□□□□ 0.89
SCARB1-201ENST00000261693 MYO1EQ12965 1108 aa20.61■□□□□ 0.89
SCARB1-201ENST00000261693 MCOLN2Q8IZK6 566 aa20.61■□□□□ 0.89
SCARB1-201ENST00000261693 POMGNT1Q8WZA1 660 aa20.61■□□□□ 0.89
SCARB1-201ENST00000261693 KLHL29Q96CT2 875 aa20.61■□□□□ 0.89
SCARB1-201ENST00000261693 NAALADL1Q9UQQ1 740 aa20.61■□□□□ 0.89
SCARB1-201ENST00000261693 COQ4Q9Y3A0 265 aa20.61■□□□□ 0.89
SCARB1-201ENST00000261693 ATP9AO75110 1047 aa20.61■□□□□ 0.89
SCARB1-201ENST00000261693 MYCLP12524 364 aaPredicted RBP20.61■□□□□ 0.89
SCARB1-201ENST00000261693 COPS2P61201 443 aa20.61■□□□□ 0.89
SCARB1-201ENST00000261693 GALNTL6Q49A17 601 aa20.61■□□□□ 0.89
SCARB1-201ENST00000261693 AGAP11Q8TF27 550 aa20.61■□□□□ 0.89
SCARB1-201ENST00000261693 PAIP2Q9BPZ3 127 aaKnown RBP20.61■□□□□ 0.89
SCARB1-201ENST00000261693 ST6GALNAC4Q9H4F1 302 aa20.61■□□□□ 0.89
SCARB1-201ENST00000261693 ATP6V0A4Q9HBG4 840 aa20.61■□□□□ 0.89
SCARB1-201ENST00000261693 ECM2O94769 699 aaPredicted RBP20.6■□□□□ 0.89
SCARB1-201ENST00000261693 GBP2P32456 591 aaPredicted RBP20.6■□□□□ 0.89
SCARB1-201ENST00000261693 SSR1P43307 286 aaKnown RBP20.6■□□□□ 0.89
SCARB1-201ENST00000261693 CYP4F22Q6NT55 531 aa20.6■□□□□ 0.89
SCARB1-201ENST00000261693 SLC39A4Q6P5W5 647 aa20.6■□□□□ 0.89
SCARB1-201ENST00000261693 FAM160B2Q86V87 743 aa20.6■□□□□ 0.89
SCARB1-201ENST00000261693 ATL2Q8NHH9 583 aa20.6■□□□□ 0.89
SCARB1-201ENST00000261693 THOC1Q96FV9 657 aaKnown RBP20.6■□□□□ 0.89
SCARB1-201ENST00000261693 DDX27Q96GQ7 796 aaKnown RBP20.6■□□□□ 0.89
SCARB1-201ENST00000261693 IWS1Q96ST2 819 aa20.6■□□□□ 0.89
SCARB1-201ENST00000261693 TCEAL9Q9UHQ7 104 aa20.6■□□□□ 0.89
SCARB1-201ENST00000261693 FEM1BQ9UK73 627 aa20.6■□□□□ 0.89
SCARB1-201ENST00000261693 EXOC7Q9UPT5 735 aa20.6■□□□□ 0.89
SCARB1-201ENST00000261693 ARL2BPQ9Y2Y0 163 aa20.6■□□□□ 0.89
SCARB1-201ENST00000261693 ZNF536O15090 1300 aa20.6■□□□□ 0.89
SCARB1-201ENST00000261693 ZNF646O15015 1829 aaPredicted RBP20.6■□□□□ 0.89
SCARB1-201ENST00000261693 YDJCA8MPS7 323 aa20.6■□□□□ 0.89
SCARB1-201ENST00000261693 KRT16P08779 473 aa20.6■□□□□ 0.89
SCARB1-201ENST00000261693 UNGP13051 313 aaPredicted RBP20.6■□□□□ 0.89
SCARB1-201ENST00000261693 CAP2P40123 477 aa20.6■□□□□ 0.89
SCARB1-201ENST00000261693 ZNF268Q14587 947 aaPredicted RBP20.6■□□□□ 0.89
SCARB1-201ENST00000261693 CGB2Q6NT52 195 aa20.6■□□□□ 0.89
SCARB1-201ENST00000261693 PASD1Q8IV76 773 aa20.6■□□□□ 0.89
SCARB1-201ENST00000261693 TEX2Q8IWB9 1127 aa20.6■□□□□ 0.89
SCARB1-201ENST00000261693 BSNDQ8WZ55 320 aa20.6■□□□□ 0.89
SCARB1-201ENST00000261693 GSTTP1A0A1W2PQM5 241 aa20.59■□□□□ 0.89
SCARB1-201ENST00000261693 BNIP1Q12981 228 aa20.59■□□□□ 0.89
SCARB1-201ENST00000261693 DMP1Q13316 513 aaPredicted RBP20.59■□□□□ 0.89
SCARB1-201ENST00000261693 FAM47EQ6ZV65 393 aa20.59■□□□□ 0.89
SCARB1-201ENST00000261693 GRK7Q8WTQ7 553 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms