RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 FRA10AC1Q70Z53 315 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 SFR1Q86XK3 245 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 LRRC49Q8IUZ0 686 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 NUDT12Q9BQG2 462 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 EMILIN2Q9BXX0 1053 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 ZNF70Q9UC06 446 aaPredicted RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 COPEO14579 308 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 PRCPP42785 496 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 HK2P52789 917 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 FAF2Q96CS3 445 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 OSBPL9Q96SU4 736 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 NT5C1AQ9BXI3 368 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 NIF3L1Q9GZT8 377 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 WWP1Q9H0M0 922 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 KCND1Q9NSA2 647 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 FBXL5Q9UKA1 691 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 UBQLN1Q9UMX0 589 aaKnown RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 KANSL1LA0AUZ9 987 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 PRKCBP05771 671 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 TMEM253P0C7T8 217 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 RPL10AP62906 217 aaKnown RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 WASHC5Q12768 1159 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 NFE2Q16621 373 aaPredicted RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 LRRC8BQ6P9F7 803 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 SCYL3Q8IZE3 742 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 BCAS4Q8TDM0 211 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 CYTH2Q99418 400 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 DRG1Q9Y295 367 aaKnown RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 STARD13Q9Y3M8 1113 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 CLUHO75153 1309 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 KLHL2O95198 593 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 GUCY2CP25092 1073 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 LHX1P48742 406 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 FMO5P49326 533 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 MAEAQ7L5Y9 396 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 TTC30AQ86WT1 665 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 TTC30BQ8N4P2 665 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 OLFM3Q96PB7 478 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 CALN1Q9BXU9 219 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 SPATS2LQ9NUQ6 558 aaKnown RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 STOML1Q9UBI4 398 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 ABT1Q9ULW3 272 aaKnown RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 CNTNAP5Q8WYK1 1306 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 GDF11O95390 407 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 FGF19O95750 216 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 HTR7P34969 479 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 RGS4P49798 205 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 BCAR1P56945 870 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 RBM43Q6ZSC3 357 aaKnown RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 RIN3Q8TB24 985 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 SLC20A1Q8WUM9 679 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 AGPAT1Q99943 283 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 CICQ96RK0 1608 aaPredicted RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 SRRM3A6NNA2 597 aaPredicted RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 SNX2O60749 519 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 RTP1P59025 263 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 DRAP1Q14919 205 aaPredicted RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 ZNF662Q6ZS27 426 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 ATP6V1E2Q96A05 226 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 IDI2Q9BXS1 227 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 KIAA1683Q9H0B3 1180 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 SEPT10Q9P0V9 454 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 KLHL8Q9P2G9 620 aaPredicted RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 DPYSL4O14531 572 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 ITIH5Q86UX2 942 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 C4orf19Q8IY42 314 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 MRPL48Q96GC5 212 aaKnown RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 COLEC11Q9BWP8 271 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 WHRNQ9P202 907 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 STX18Q9P2W9 335 aaKnown RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 BLOC1S6Q9UL45 172 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 CYP2C9P11712 490 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 TSHRP16473 764 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 CYP11B2P19099 503 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 CAPRIN1Q14444 709 aaKnown RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 PTPAQ15257 358 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 HIF1AQ16665 826 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 CYB5R4Q7L1T6 521 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 PATL1Q86TB9 770 aaKnown RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 ACRBPQ8NEB7 543 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 OR6J1Q8NGC5 347 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 UCMAQ8WVF2 138 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 ARHGEF26Q96DR7 871 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 EFCC1Q9HA90 598 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 HDAC6Q9UBN7 1215 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 GABBR1Q9UBS5 961 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 TJP2Q9UDY2 1190 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 GTF3C4Q9UKN8 822 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 ITGA11Q9UKX5 1188 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 NBPF26B4DH59 902 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 GSTA4O15217 222 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 PLEKHA8P1O95397 391 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 MYL3P08590 195 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 CES1P23141 567 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 LRMPQ12912 555 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 GLB1LQ6UWU2 654 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 NBPF15Q8N660 670 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 PROCA1Q8NCQ7 364 aaPredicted RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 OR6B3Q8NGW1 331 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 SP110Q9HB58 689 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms