RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 CRELD2Q6UXH1 353 aaPredicted RBP20.33■□□□□ 0.84
COL4A3BP-201ENST00000261415 NLRP14Q86W24 1093 aa20.33■□□□□ 0.84
COL4A3BP-201ENST00000261415 KLHL23Q8NBE8 558 aa20.33■□□□□ 0.84
COL4A3BP-201ENST00000261415 SPAG5Q96R06 1193 aa20.33■□□□□ 0.84
COL4A3BP-201ENST00000261415 MMS19Q96T76 1030 aa20.33■□□□□ 0.84
COL4A3BP-201ENST00000261415 EBF2Q9HAK2 575 aa20.33■□□□□ 0.84
COL4A3BP-201ENST00000261415 EXOC7Q9UPT5 735 aa20.33■□□□□ 0.84
COL4A3BP-201ENST00000261415 MBLAC1A4D2B0 266 aaPredicted RBP20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 LIN7AO14910 233 aaPredicted RBP20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 SRGAP2CP0DJJ0 459 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 RAB27AP51159 221 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 HIC1Q14526 733 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 KCNA10Q16322 511 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 NFIL3Q16649 462 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 SND1Q7KZF4 910 aaKnown RBP eCLIP20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 RPUSD2Q8IZ73 545 aaKnown RBP20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 RNF149Q8NC42 400 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 SPDYE1Q8NFV5 336 aaPredicted RBP20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 THOC1Q96FV9 657 aaKnown RBP20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 CTAGE1Q96RT6 745 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 OSBPL9Q96SU4 736 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 HDAC6Q9UBN7 1215 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 CETN3O15182 167 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 ASAP2O43150 1006 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 AHCYL1O43865 530 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 RPL13P26373 211 aaKnown RBP20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 ADAM17P78536 824 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 PAPD7Q5XG87 772 aaKnown RBP20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 LHX8Q68G74 356 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 RNF180Q86T96 592 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 KIRREL3Q8IZU9 778 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 C7orf31Q8N865 590 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 PCSK9Q8NBP7 692 aaKnown RBP20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 MYCBPAPQ8TBZ2 947 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 NLRP4Q96MN2 994 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 AKT3Q9Y243 479 aa20.32■□□□□ 0.84
COL4A3BP-201ENST00000261415 LRRC10BA6NIK2 292 aa20.31■□□□□ 0.84
COL4A3BP-201ENST00000261415 TISP43B9A030 160 aa20.31■□□□□ 0.84
COL4A3BP-201ENST00000261415 FESP07332 822 aa20.31■□□□□ 0.84
COL4A3BP-201ENST00000261415 TFDP1Q14186 410 aa20.31■□□□□ 0.84
COL4A3BP-201ENST00000261415 TTMPQ5BVD1 217 aa20.31■□□□□ 0.84
COL4A3BP-201ENST00000261415 CCHCR1Q8TD31 782 aa20.31■□□□□ 0.84
COL4A3BP-201ENST00000261415 TAB2Q9NYJ8 693 aa20.31■□□□□ 0.84
COL4A3BP-201ENST00000261415 CORO1CQ9ULV4 474 aaPredicted RBP20.31■□□□□ 0.84
COL4A3BP-201ENST00000261415 K7ERI5 159 aa20.3■□□□□ 0.84
COL4A3BP-201ENST00000261415 HOXC8P31273 242 aa20.3■□□□□ 0.84
COL4A3BP-201ENST00000261415 STRN3Q13033 797 aa20.3■□□□□ 0.84
COL4A3BP-201ENST00000261415 EMBQ6PCB8 327 aa20.3■□□□□ 0.84
COL4A3BP-201ENST00000261415 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.3■□□□□ 0.84
COL4A3BP-201ENST00000261415 TMEM134Q9H6X4 195 aa20.3■□□□□ 0.84
COL4A3BP-201ENST00000261415 COQ9O75208 318 aa20.3■□□□□ 0.84
COL4A3BP-201ENST00000261415 VTNP04004 478 aa20.3■□□□□ 0.84
COL4A3BP-201ENST00000261415 EFNA5P52803 228 aa20.3■□□□□ 0.84
COL4A3BP-201ENST00000261415 COPB1P53618 953 aaKnown RBP20.3■□□□□ 0.84
COL4A3BP-201ENST00000261415 BZW1Q7L1Q6 419 aaKnown RBP20.3■□□□□ 0.84
COL4A3BP-201ENST00000261415 ZBTB8OSQ8IWT0 167 aa20.3■□□□□ 0.84
COL4A3BP-201ENST00000261415 KIAA0319LQ8IZA0 1049 aa20.3■□□□□ 0.84
COL4A3BP-201ENST00000261415 ZNF668Q96K58 619 aaPredicted RBP20.3■□□□□ 0.84
COL4A3BP-201ENST00000261415 C17orf102A2RUQ5 167 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 MTIF2P46199 727 aaKnown RBP20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 EPHB4P54760 987 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 SNRPFP62306 86 aaKnown RBP20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 SLC9C1Q4G0N8 1177 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 CYP26C1Q6V0L0 522 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 ACRBPQ8NEB7 543 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 TUBGCP2Q9BSJ2 902 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 C2orf40Q9H1Z8 148 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 VPS16Q9H269 839 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 DMAC2Q9NW81 257 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 ANKRD63C9JTQ0 380 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 HNRNPDLO14979 420 aaKnown RBP20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 TREHO43280 583 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 BUB1BO60566 1050 aaPredicted RBP20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 GNA14O95837 355 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 CYP2C9P11712 490 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 NNTQ13423 1086 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 LACTB2Q53H82 288 aaPredicted RBP20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 SLC9A9Q8IVB4 645 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 C12orf56Q8IXR9 622 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 EHBP1Q8NDI1 1231 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 ARL8AQ96BM9 186 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 CCDC113Q9H0I3 377 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 HAUS4Q9H6D7 363 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 RPS6KL1Q9Y6S9 549 aa20.29■□□□□ 0.84
COL4A3BP-201ENST00000261415 RTN3O95197 1032 aaPredicted RBP20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 GNAT1P11488 350 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 CASP4P49662 377 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 CYP2J2P51589 502 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 MARSP56192 900 aaKnown RBP20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 PTENP60484 403 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 ZNF200P98182 395 aaPredicted RBP20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 SLC39A4Q6P5W5 647 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 GSPT2Q8IYD1 628 aaKnown RBP20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 C1orf131Q8NDD1 294 aaKnown RBP20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 TRIM58Q8NG06 486 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 TMEM174Q8WUU8 243 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 BICD1Q96G01 975 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 PPP1R16BQ96T49 567 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 CBWD1Q9BRT8 395 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 NFKBIZQ9BYH8 718 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms