RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 TKTP29401 623 aaKnown RBP20.83■□□□□ 0.93
TM6SF1-201ENST00000258909 OR1D2P34982 312 aa20.83■□□□□ 0.93
TM6SF1-201ENST00000258909 MCM2P49736 904 aa20.83■□□□□ 0.93
TM6SF1-201ENST00000258909 NTHL1P78549 312 aa20.83■□□□□ 0.93
TM6SF1-201ENST00000258909 LIN9Q5TKA1 542 aa20.83■□□□□ 0.93
TM6SF1-201ENST00000258909 MPZL3Q6UWV2 235 aa20.83■□□□□ 0.93
TM6SF1-201ENST00000258909 RSPO2Q6UXX9 243 aaPredicted RBP20.83■□□□□ 0.93
TM6SF1-201ENST00000258909 GRASPQ7Z6J2 395 aaPredicted RBP20.83■□□□□ 0.93
TM6SF1-201ENST00000258909 FLCNQ8NFG4 579 aa20.83■□□□□ 0.93
TM6SF1-201ENST00000258909 ACAP3Q96P50 834 aa20.83■□□□□ 0.93
TM6SF1-201ENST00000258909 NTPCRQ9BSD7 190 aaKnown RBP20.83■□□□□ 0.93
TM6SF1-201ENST00000258909 TOPORSQ9NS56 1045 aaPredicted RBP20.83■□□□□ 0.93
TM6SF1-201ENST00000258909 IGSF9Q9P2J2 1179 aa20.83■□□□□ 0.93
TM6SF1-201ENST00000258909 ANKFY1Q9P2R3 1169 aa20.83■□□□□ 0.93
TM6SF1-201ENST00000258909 DUSP12Q9UNI6 340 aa20.83■□□□□ 0.93
TM6SF1-201ENST00000258909 H0Y858 1186 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 TMEM189-UBE2V1I3L0A0 370 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 CCL16O15467 120 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 MEFVO15553 781 aaPredicted RBP20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 PAPLNO95428 1278 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 C8AP07357 584 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 MCF2P10911 925 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 STRN3Q13033 797 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 TMEM119Q4V9L6 283 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 XKR4Q5GH76 650 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 ARL6IP4Q66PJ3 421 aaKnown RBP20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 TMEM161BQ8NDZ6 487 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 SPIRE2Q8WWL2 714 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 SNX27Q96L92 541 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 UROC1Q96N76 676 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 TIPINQ9BVW5 301 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 EPS15L1Q9UBC2 864 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 FBXL21Q9UKT6 434 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 POLIQ9UNA4 740 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 CDY1Q9Y6F8 540 aa20.82■□□□□ 0.92
TM6SF1-201ENST00000258909 DHX8Q14562 1220 aaKnown RBP20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 ARSHQ5FYA8 562 aa20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 PPM1LQ5SGD2 360 aa20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 ASTLQ6HA08 431 aaPredicted RBP20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 PDXDC1Q6P996 788 aa20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 LRRC15Q8TF66 581 aa20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 C18orf25Q96B23 403 aaPredicted RBP20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 ZFHX2Q9C0A1 2572 aaPredicted RBP20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 PODXLO00592 558 aa20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 CFHP08603 1231 aa20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 MAPTP10636 758 aaKnown RBP20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 LAMP2P13473 410 aa20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 SMTNP53814 917 aa20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 GRIN1Q05586 938 aa20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 RAB33AQ14088 237 aa20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 AXDND1Q5T1B0 1012 aaPredicted RBP20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 SIX5Q8N196 739 aa20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 SLC44A3Q8N4M1 653 aa20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 SLC7A14Q8TBB6 771 aa20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 DDX27Q96GQ7 796 aaKnown RBP20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 MTRRQ9UBK8 725 aa20.81■□□□□ 0.92
TM6SF1-201ENST00000258909 MYO15AQ9UKN7 3530 aa20.8■□□□□ 0.92
TM6SF1-201ENST00000258909 NPR3P17342 541 aa20.8■□□□□ 0.92
TM6SF1-201ENST00000258909 FSHRP23945 695 aa20.8■□□□□ 0.92
TM6SF1-201ENST00000258909 CWF19L1Q69YN2 538 aaKnown RBP20.8■□□□□ 0.92
TM6SF1-201ENST00000258909 TMEM130Q8N3G9 435 aa20.8■□□□□ 0.92
TM6SF1-201ENST00000258909 ATOH1Q92858 354 aaPredicted RBP20.8■□□□□ 0.92
TM6SF1-201ENST00000258909 SLC38A7Q9NVC3 462 aa20.8■□□□□ 0.92
TM6SF1-201ENST00000258909 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.8■□□□□ 0.92
TM6SF1-201ENST00000258909 DAXXQ9UER7 740 aaPredicted RBP20.8■□□□□ 0.92
TM6SF1-201ENST00000258909 GALR2O43603 387 aaPredicted RBP20.79■□□□□ 0.92
TM6SF1-201ENST00000258909 TRAPPC3O43617 180 aa20.79■□□□□ 0.92
TM6SF1-201ENST00000258909 PI15O43692 258 aa20.79■□□□□ 0.92
TM6SF1-201ENST00000258909 TOM1L1O75674 476 aa20.79■□□□□ 0.92
TM6SF1-201ENST00000258909 HNRNPA1P09651 372 aaKnown RBP eCLIP20.79■□□□□ 0.92
TM6SF1-201ENST00000258909 KCNE1P15382 129 aa20.79■□□□□ 0.92
TM6SF1-201ENST00000258909 UBA7P41226 1012 aa20.79■□□□□ 0.92
TM6SF1-201ENST00000258909 MATR3P43243 847 aaKnown RBP eCLIP20.79■□□□□ 0.92
TM6SF1-201ENST00000258909 NOLC1Q14978 699 aaKnown RBP eCLIP20.79■□□□□ 0.92
TM6SF1-201ENST00000258909 SLC10A6Q3KNW5 377 aa20.79■□□□□ 0.92
TM6SF1-201ENST00000258909 KCTD17Q8N5Z5 321 aa20.79■□□□□ 0.92
TM6SF1-201ENST00000258909 HAPLN2Q9GZV7 340 aa20.79■□□□□ 0.92
TM6SF1-201ENST00000258909 HCFC1R1Q9NWW0 138 aa20.79■□□□□ 0.92
TM6SF1-201ENST00000258909 CNTN3Q9P232 1028 aa20.79■□□□□ 0.92
TM6SF1-201ENST00000258909 PDCD11Q14690 1871 aaKnown RBP20.78■□□□□ 0.92
TM6SF1-201ENST00000258909 SPAG1Q07617 926 aa20.78■□□□□ 0.92
TM6SF1-201ENST00000258909 ANKS3Q6ZW76 656 aa20.78■□□□□ 0.92
TM6SF1-201ENST00000258909 GPBP1Q86WP2 473 aa20.78■□□□□ 0.92
TM6SF1-201ENST00000258909 CALML4Q96GE6 196 aa20.78■□□□□ 0.92
TM6SF1-201ENST00000258909 AK8Q96MA6 479 aa20.78■□□□□ 0.92
TM6SF1-201ENST00000258909 REEP2Q9BRK0 252 aa20.78■□□□□ 0.92
TM6SF1-201ENST00000258909 KCND2Q9NZV8 630 aa20.78■□□□□ 0.92
TM6SF1-201ENST00000258909 BACE2Q9Y5Z0 518 aa20.78■□□□□ 0.92
TM6SF1-201ENST00000258909 NOTCH4Q99466 2003 aa20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 VPS37CA5D8V6 355 aaPredicted RBP20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 CLDN3O15551 220 aa20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 CLCN5P51795 746 aa20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 ARPP19P56211 112 aa20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 KARSQ15046 597 aaKnown RBP20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 SF3A1Q15459 793 aaKnown RBP20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 VARS2Q5ST30 1063 aaKnown RBP20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 ZPBP2Q6X784 338 aa20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 HAUS6Q7Z4H7 955 aa20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 ITFG1Q8TB96 612 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms