RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 APOBEC3FQ8IUX4 373 aaKnown RBP17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 PASD1Q8IV76 773 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 CCDC105Q8IYK2 499 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 CNKSR2Q8WXI2 1034 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 SGIP1Q9BQI5 828 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 TARS2Q9BW92 718 aaKnown RBP17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 RASAL2Q9UJF2 1139 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 EBAG9O00559 213 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 C4BPAP04003 597 aaKnown RBP17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 MAPK4P31152 587 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 RWDD2BP57060 319 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 IFFO1Q0D2I5 559 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 PSMD6Q15008 389 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 STXBP2Q15833 593 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 CLUL1Q15846 466 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 ZACNQ401N2 412 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 MCOLN2Q8IZK6 566 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 ANKRD35Q8N283 1001 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 MORC4Q8TE76 937 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 FAM107BQ9H098 131 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 EPN3Q9H201 632 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 APOBEC3GQ9HC16 384 aaKnown RBP17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 WDR90Q96KV7 1748 aa17.7■□□□□ 0.42
UBQLN1-201ENST00000257468 UMODL1Q5DID0 1318 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 HSPA6P17066 643 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 SCP2P22307 547 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 COILP38432 576 aaPredicted RBP17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 HIRAP54198 1017 aaPredicted RBP17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 PMS2P54278 862 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 CORO7P57737 925 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 MAGOHP61326 146 aaKnown RBP17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 ODF2Q5BJF6 829 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 RUFY4Q6ZNE9 571 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 UHMK1Q8TAS1 419 aaKnown RBP17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 C1orf54Q8WWF1 131 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 RNF25Q96BH1 459 aaPredicted RBP17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 CYFIP2Q96F07 1278 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 HERPUD2Q9BSE4 406 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 PORCNQ9H237 461 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 FBXO40Q9UH90 709 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 SLC12A6Q9UHW9 1150 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 MAFBQ9Y5Q3 323 aaPredicted RBP17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 LTBP3Q9NS15 1303 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 TTLL13PA6NNM8 815 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 DRP2Q13474 957 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 SNX1Q13596 522 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 WDR44Q5JSH3 913 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 DEPTORQ8TB45 409 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 DHX33Q9H6R0 707 aaKnown RBP17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 PPANQ9NQ55 473 aaKnown RBP17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 HOXC10Q9NYD6 342 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 RBAKQ9NYW8 714 aaPredicted RBP17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 CD2APQ9Y5K6 639 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 FAM169AQ9Y6X4 670 aa17.69■□□□□ 0.42
UBQLN1-201ENST00000257468 K7ERI5 159 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 O00370 1275 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 CAND2O75155 1236 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 STAM2O75886 525 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 GGPS1O95749 300 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 CLDN10P78369 228 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 OR5B17Q8NGF7 314 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 PCYT2Q99447 389 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 RASSF4Q9H2L5 321 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 R3HDMLQ9H3Y0 253 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 LOC285556D6RIA3 1793 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 SMIM23A6NLE4 172 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 ZC3H11AO75152 810 aaKnown RBP eCLIP17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 ACO1P21399 889 aaKnown RBP17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 UBA1P22314 1058 aaKnown RBP17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 CYP1B1Q16678 543 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 ENOSF1Q7L5Y1 443 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 EEPD1Q7L9B9 569 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 ATG4AQ8WYN0 398 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 CEP89Q96ST8 783 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 MSTO1Q9BUK6 570 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 SEMA4AQ9H3S1 761 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 BTBD7Q9P203 1132 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 MTUS1Q9ULD2 1270 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 PCDHB2Q9Y5E7 798 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 STYXL1Q9Y6J8 313 aa17.68■□□□□ 0.42
UBQLN1-201ENST00000257468 A6NNZ2 444 aa17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 E7EVH7 732 aa17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 ERLIN2O94905 339 aa17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 ATG7O95352 703 aa17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 FGFR4P22455 802 aa17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 ARL2P36404 184 aa17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 ALDH5A1P51649 535 aaPredicted RBP17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 DRG2P55039 364 aaKnown RBP17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 TUBB8Q3ZCM7 444 aa17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 AGBL2Q5U5Z8 902 aa17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 TMEM270Q6UE05 265 aa17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 SLC7A3Q8WY07 619 aa17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 PABPC3Q9H361 631 aaKnown RBP17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 POLR2AP24928 1970 aaKnown RBP17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 SIP14410 1827 aa17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 H0YCG3 227 aa17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 GJB6O95452 261 aa17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 PPP2R2AP63151 447 aa17.67■□□□□ 0.42
UBQLN1-201ENST00000257468 SLC29A2Q14542 456 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms