RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 HLA-DRAP01903 254 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 CHRNA1P02708 482 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 CYLC1P35663 651 aaPredicted RBP10.21□□□□□ -0.78
NIP7-202ENST00000254941 SOX5P35711 763 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 GRM5P41594 1212 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 PRKCIP41743 596 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 STAT1P42224 750 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 MGAT3Q09327 533 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 PTK7Q13308 1070 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 BIRC3Q13489 604 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 ASIC2Q16515 512 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 ASTE1Q2TB18 679 aaPredicted RBP10.21□□□□□ -0.78
NIP7-202ENST00000254941 SLC10A6Q3KNW5 377 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 FAM228AQ86W67 206 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 ARHGEF19Q8IW93 802 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 REXO1L1PQ8IX06 675 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 EFCAB13Q8IY85 973 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 CCDC42Q96M95 316 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 NT5C1BQ96P26 610 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 ACAP3Q96P50 834 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 ASB7Q9H672 318 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 PHF24Q9UPV7 400 aa10.21□□□□□ -0.78
NIP7-202ENST00000254941 PIN4Q9Y237 131 aaKnown RBP10.21□□□□□ -0.78
NIP7-202ENST00000254941 BZW2Q9Y6E2 419 aaKnown RBP10.21□□□□□ -0.78
NIP7-202ENST00000254941 MROH7Q68CQ1 1323 aa10.2□□□□□ -0.78
NIP7-202ENST00000254941 EIF3CLB5ME19 914 aaKnown RBP10.2□□□□□ -0.78
NIP7-202ENST00000254941 KBTBD13C9JR72 458 aa10.2□□□□□ -0.78
NIP7-202ENST00000254941 DNM1LO00429 736 aa10.2□□□□□ -0.78
NIP7-202ENST00000254941 LCA5LO95447 670 aa10.2□□□□□ -0.78
NIP7-202ENST00000254941 NPTXRO95502 500 aa10.2□□□□□ -0.78
NIP7-202ENST00000254941 FERP16591 822 aa10.2□□□□□ -0.78
NIP7-202ENST00000254941 EIF4A3P38919 411 aaKnown RBP10.2□□□□□ -0.78
NIP7-202ENST00000254941 PIK3CAP42336 1068 aa10.2□□□□□ -0.78
NIP7-202ENST00000254941 GCNT1Q02742 428 aa10.2□□□□□ -0.78
NIP7-202ENST00000254941 ARID5AQ03989 594 aa10.2□□□□□ -0.78
NIP7-202ENST00000254941 KLHL30Q0D2K2 578 aa10.2□□□□□ -0.78
NIP7-202ENST00000254941 TDRD12Q587J7 1177 aaKnown RBP10.2□□□□□ -0.78
NIP7-202ENST00000254941 NYAP1Q6ZVC0 841 aa10.2□□□□□ -0.78
NIP7-202ENST00000254941 TRAPPC11Q7Z392 1133 aa10.2□□□□□ -0.78
NIP7-202ENST00000254941 PPM1KQ8N3J5 372 aa10.2□□□□□ -0.78
NIP7-202ENST00000254941 HELQQ8TDG4 1101 aa10.2□□□□□ -0.78
NIP7-202ENST00000254941 FAM81BQ96LP2 452 aa10.2□□□□□ -0.78
NIP7-202ENST00000254941 EIF3CQ99613 913 aaKnown RBP10.2□□□□□ -0.78
NIP7-202ENST00000254941 MTMR12Q9C0I1 747 aa10.2□□□□□ -0.78
NIP7-202ENST00000254941 STARD7Q9NQZ5 370 aa10.2□□□□□ -0.78
NIP7-202ENST00000254941 TRMT13Q9NUP7 481 aaKnown RBP10.2□□□□□ -0.78
NIP7-202ENST00000254941 NOC2LQ9Y3T9 749 aaKnown RBP10.2□□□□□ -0.78
NIP7-202ENST00000254941 SCN1AP35498 2009 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 A0A0U1RQG5 324 aaPredicted RBP10.19□□□□□ -0.78
NIP7-202ENST00000254941 GOLGA6L9A6NEM1 432 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 LACTBL1A8MY62 500 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 FOXN3O00409 490 aaPredicted RBP10.19□□□□□ -0.78
NIP7-202ENST00000254941 EVI5O60447 810 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 THPOP40225 353 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 KIF11P52732 1056 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 MFAP3P55082 362 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 KRT83P78385 493 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 TFAMQ00059 246 aaKnown RBP10.19□□□□□ -0.78
NIP7-202ENST00000254941 NCOA4Q13772 614 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 MTFR1Q15390 333 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 ARHGAP44Q17R89 818 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 TRIM71Q2Q1W2 868 aaKnown RBP10.19□□□□□ -0.78
NIP7-202ENST00000254941 WDR44Q5JSH3 913 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 ENOSF1Q7L5Y1 443 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 CD302Q8IX05 232 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 ACRBPQ8NEB7 543 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 DHX38Q92620 1227 aaKnown RBP10.19□□□□□ -0.78
NIP7-202ENST00000254941 TATDN2Q93075 761 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 ANKRD36BP1Q96IX9 119 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 KREMEN1Q96MU8 473 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 PI4K2AQ9BTU6 479 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 CCDC94Q9BW85 323 aaPredicted RBP10.19□□□□□ -0.78
NIP7-202ENST00000254941 EIF2AQ9BY44 585 aaKnown RBP10.19□□□□□ -0.78
NIP7-202ENST00000254941 SEZ6LQ9BYH1 1024 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 PLEKHA5Q9HAU0 1116 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 C1orf112Q9NSG2 853 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 NOD1Q9Y239 953 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 REXO2Q9Y3B8 237 aaKnown RBP10.19□□□□□ -0.78
NIP7-202ENST00000254941 C2CD2Q9Y426 696 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 RBAK-RBAKDNI3L0D1 243 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 ARVCFO00192 962 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 AKR1B10O60218 316 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 CAND2O75155 1236 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 PHACTR2O75167 634 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 RPS6KA5O75582 802 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 GFPT2O94808 682 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 IPO7O95373 1038 aaKnown RBP10.19□□□□□ -0.78
NIP7-202ENST00000254941 ASS1P00966 412 aaKnown RBP10.19□□□□□ -0.78
NIP7-202ENST00000254941 CST3P01034 146 aaPredicted RBP10.19□□□□□ -0.78
NIP7-202ENST00000254941 CTSHP09668 335 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 TMEM191BP0C7N4 346 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 CCDC172P0C7W6 258 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 PNMA6AP0CW24 399 aaPredicted RBP10.19□□□□□ -0.78
NIP7-202ENST00000254941 CCL5P13501 91 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 PTK2Q05397 1052 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 FAM26DQ5JW98 314 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 JADE1Q6IE81 842 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 NT5DC4Q86YG4 428 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 GPIHBP1Q8IV16 184 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 FAM71AQ8IYT1 594 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms