RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 DEFB103AP81534 67 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 ARID5AQ03989 594 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 NCBP1Q09161 790 aaKnown RBP13.1□□□□□ -0.31
NIP7-201ENST00000254940 KCNH2Q12809 1159 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 MFSD5Q6N075 450 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 CRELD2Q6UXH1 353 aaPredicted RBP13.1□□□□□ -0.31
NIP7-201ENST00000254940 TRIM59Q8IWR1 403 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 PDE11AQ9HCR9 933 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 TNFSF13BQ9Y275 285 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 IPPQ9Y573 584 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 POU5F1BQ06416 359 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 PAN2Q504Q3 1202 aaKnown RBP13.1□□□□□ -0.31
NIP7-201ENST00000254940 PLEKHG4Q58EX7 1191 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 SLC27A1Q6PCB7 646 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 CYP26C1Q6V0L0 522 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 ZNF365Q70YC5 407 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 SEPT8Q92599 483 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 CXXC1Q9P0U4 656 aaPredicted RBP13.1□□□□□ -0.31
NIP7-201ENST00000254940 TRAF3IP3Q9Y228 551 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 PAXBP1Q9Y5B6 917 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 CITO14578 2027 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 CDH23Q9H251 3354 aa13.1□□□□□ -0.31
NIP7-201ENST00000254940 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.09□□□□□ -0.31
NIP7-201ENST00000254940 ZNF263O14978 683 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 CETN3O15182 167 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 URI1O94763 535 aaPredicted RBP13.09□□□□□ -0.31
NIP7-201ENST00000254940 CLSTN1O94985 981 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 NDUFA10O95299 355 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 CDC42EP1Q00587 391 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 ALCAMQ13740 583 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 SNRNP35Q16560 246 aaKnown RBP13.09□□□□□ -0.31
NIP7-201ENST00000254940 PPP4R3CPQ6ZMV5 832 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 TMTC1Q8IUR5 882 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 XXYLT1Q8NBI6 393 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 ADPGKQ9BRR6 497 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 NHEJ1Q9H9Q4 299 aaPredicted RBP13.09□□□□□ -0.31
NIP7-201ENST00000254940 FAM105AQ9NUU6 356 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 ARHGAP20Q9P2F6 1191 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 PLAGL2Q9UPG8 496 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 EPN1Q9Y6I3 576 aaPredicted RBP13.09□□□□□ -0.31
NIP7-201ENST00000254940 MICAL3Q7RTP6 2002 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 PTPRJQ12913 1337 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 ENPP3O14638 875 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 RECQL4O94761 1208 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 KIF20AO95235 890 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 FECHP22830 423 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 PROZP22891 400 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 CDR1P51861 262 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 POLR2FP61218 127 aaKnown RBP13.09□□□□□ -0.31
NIP7-201ENST00000254940 FPGSQ05932 587 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 FAM187BQ17R55 369 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 CBWD6Q4V339 395 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 CBWD3Q5JTY5 395 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 CBWD5Q5RIA9 395 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 DPY19L2P1Q6NXN4 242 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 ZPBP2Q6X784 338 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 FAM186BQ8IYM0 893 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 TMEM199Q8N511 208 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 SLC17A8Q8NDX2 589 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 HVCN1Q96D96 273 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 BORCS6Q96GS4 357 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 LACRTQ9GZZ8 138 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 GUCA1BQ9UMX6 200 aa13.09□□□□□ -0.31
NIP7-201ENST00000254940 UBE4BO95155 1302 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 FAM189A1O60320 539 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 ATF7P17544 494 aaPredicted RBP13.08□□□□□ -0.32
NIP7-201ENST00000254940 IGFBP6P24592 240 aaPredicted RBP13.08□□□□□ -0.32
NIP7-201ENST00000254940 MLH1P40692 756 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 ARHGAP25P42331 645 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 MCL1Q07820 350 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 DSC3Q14574 896 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 C9orf50Q5SZB4 431 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 GPD1LQ8N335 351 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 GAD1Q99259 594 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.08□□□□□ -0.321e-11■□□□□ 9.9
NIP7-201ENST00000254940 LSM14BQ9BX40 385 aaKnown RBP13.08□□□□□ -0.32
NIP7-201ENST00000254940 NAA15Q9BXJ9 866 aaKnown RBP13.08□□□□□ -0.32
NIP7-201ENST00000254940 SEZ6LQ9BYH1 1024 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 EPC1Q9H2F5 836 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 GOLGA2P5Q9HBQ8 144 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 RBAKQ9NYW8 714 aaPredicted RBP13.08□□□□□ -0.32
NIP7-201ENST00000254940 ANK1P16157 1881 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 LTBP2Q14767 1821 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 LACTBL1A8MY62 500 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 H0YGN5 161 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 CSPG5O95196 566 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 FGFR1OPO95684 399 aaKnown RBP13.08□□□□□ -0.32
NIP7-201ENST00000254940 POMCP01189 267 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 PIGRP01833 764 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 TERF1P54274 439 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 ZBED6P86452 979 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 TRIM14Q14142 442 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 ZC3H3Q8IXZ2 948 aaKnown RBP13.08□□□□□ -0.32
NIP7-201ENST00000254940 HELQQ8TDG4 1101 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 BAP1Q92560 729 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 SLC35C1Q96A29 364 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 C18orf25Q96B23 403 aaPredicted RBP13.08□□□□□ -0.32
NIP7-201ENST00000254940 GTPBP4Q9BZE4 634 aaKnown RBP13.08□□□□□ -0.32
NIP7-201ENST00000254940 MIOSQ9NXC5 875 aa13.08□□□□□ -0.32
NIP7-201ENST00000254940 ARMCX3Q9UH62 379 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms