RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 DMGDHQ9UI17 866 aaKnown RBP12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 TRPC6Q9Y210 931 aa12.27□□□□□ -0.44
CLUHP3-201ENST00000254109 ZBTB42B2RXF5 422 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 HNRNPDLO14979 420 aaKnown RBP12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 ABCB4P21439 1286 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 GARTP22102 1010 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 POLGP54098 1239 aaPredicted RBP12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 EPHB4P54760 987 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 SOX10P56693 466 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 RNASE9P60153 205 aaKnown RBP12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 ENPEPQ07075 957 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 LHX8Q68G74 356 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 EMBQ6PCB8 327 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 RHOT2Q8IXI1 618 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 GSPT2Q8IYD1 628 aaKnown RBP12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 GPD1LQ8N335 351 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 ZSWIM2Q8NEG5 633 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 PLEKHO2Q8TD55 490 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 PARD3BQ8TEW8 1205 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 ATP8B4Q8TF62 1192 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 BBXQ8WY36 941 aaPredicted RBP12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 MFSD14AQ96MC6 490 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 CEP89Q96ST8 783 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 KRT12Q99456 494 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.27□□□□□ -0.451e-7■□□□□ 10.2
CLUHP3-201ENST00000254109 VPS18Q9P253 973 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 HPCAL4Q9UM19 191 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 STXBP5LQ9Y2K9 1186 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 FRMPD3Q5JV73 1810 aa12.27□□□□□ -0.45
CLUHP3-201ENST00000254109 PGRMC1O00264 195 aaKnown RBP12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 MYBL2P10244 700 aa12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 AARSP49588 968 aaKnown RBP eCLIP12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 PURAQ00577 322 aaKnown RBP12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 STRN3Q13033 797 aa12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 TARBP2Q15633 366 aaKnown RBP12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 KCNA10Q16322 511 aa12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 CXCL17Q6UXB2 119 aa12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 NT5DC3Q86UY8 548 aa12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 RPUSD2Q8IZ73 545 aaKnown RBP12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 PPM1KQ8N3J5 372 aa12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 KLHDC9Q8NEP7 349 aa12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 OLIG1Q8TAK6 271 aa12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 FBXL18Q96ME1 805 aa12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.26□□□□□ -0.455e-7■■□□□ 12.5
CLUHP3-201ENST00000254109 SPC25Q9HBM1 224 aa12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 KIAA1586Q9HCI6 787 aa12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 KAT6AQ92794 2004 aa12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 EVPLQ92817 2033 aa12.26□□□□□ -0.45
CLUHP3-201ENST00000254109 ZNF233A6NK53 670 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 HBP1O60381 514 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 HEXIM1O94992 359 aaKnown RBP12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 F2P00734 622 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 INSRRP14616 1297 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 LIG4P49917 911 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 SLC26A2P50443 739 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 IGBP1P78318 339 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 NKX3-2P78367 333 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 MRPS25P82663 173 aaKnown RBP12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 CYP24A1Q07973 514 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 EMC2Q15006 297 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 CCSAPQ6IQ19 270 aaPredicted RBP12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 FBXO46Q6PJ61 603 aaPredicted RBP12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 SND1Q7KZF4 910 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 METTL13Q8N6R0 699 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 FBXL13Q8NEE6 735 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 FAM167AQ96KS9 214 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 FAM81BQ96LP2 452 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 GDAP1L1Q96MZ0 367 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 NT5C1BQ96P26 610 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 HINFPQ9BQA5 517 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 THAP2Q9H0W7 228 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 GOLPH3Q9H4A6 298 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 XPNPEP1Q9NQW7 623 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 COQ4Q9Y3A0 265 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 CCDC188H7C350 402 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 KIAA0391O15091 583 aaKnown RBP12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 BUB1BO60566 1050 aaPredicted RBP12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 RTN2O75298 545 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 FTLP02792 175 aaPredicted RBP12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 ASGR1P07306 291 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 CCL5P13501 91 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 PSEN2P49810 448 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 GPC3P51654 580 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 GPC5P78333 572 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 GUCY2DQ02846 1103 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 PAK2Q13177 524 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 NNTQ13423 1086 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 MFSD10Q14728 455 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 SLC39A4Q6P5W5 647 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 FAM71AQ8IYT1 594 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 GOLGA6L1Q8N7Z2 621 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 SLC20A1Q8WUM9 679 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 SLC7A3Q8WY07 619 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 EXOC4Q96A65 974 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 HES6Q96HZ4 224 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 ZMYND15Q9H091 742 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 RNF208Q9H0X6 261 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 OSGEPQ9NPF4 335 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 GDF3Q9NR23 364 aa12.25□□□□□ -0.45
CLUHP3-201ENST00000254109 RAB20Q9NX57 234 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms