RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 KCNH2Q12809 1159 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 ITGB3BPQ13352 177 aaPredicted RBP13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 RAD9BQ6WBX8 426 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 LRRC39Q96DD0 335 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 MS4A14Q96JA4 679 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 KLHL31Q9H511 634 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 ZWILCHQ9H900 591 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 PIH1D3Q9NQM4 214 aaKnown RBP13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 ADAMTS13Q76LX8 1427 aa13.85□□□□□ -0.19
PCDHGA3-201ENST00000253812 LRRIQ4A6NIV6 560 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 GOLGA8RI6L899 631 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 KCNQ2O43526 872 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 ZNF18P17022 549 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 ANXA13P27216 316 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 DNAJC3Q13217 504 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 ALCAMQ13740 583 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 SNX30Q5VWJ9 437 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 OR6B2Q6IFH4 312 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 IYDQ6PHW0 289 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 FUKQ8N0W3 1084 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 JADE3Q92613 823 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 DDX18Q9NVP1 670 aaKnown RBP13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 MARCOQ9UEW3 520 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 RPS6KA4O75676 772 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 UBOX5O94941 541 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 BCL10O95999 233 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 SLC4A1P02730 911 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 SOX5P35711 763 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 HSD17B3P37058 310 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 TRIM25Q14258 630 aaKnown RBP13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 CCDC142Q17RM4 750 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 TRMT5Q32P41 509 aaKnown RBP13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 EAPPQ56P03 285 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 RNF25Q96BH1 459 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 AIFM3Q96NN9 605 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 ZBED4O75132 1171 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 PHF2O75151 1096 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 TOMM70O94826 608 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 PYGMP11217 842 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 CYP19A1P11511 503 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 CPA2P48052 419 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 POU5F1BQ06416 359 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 PCNX4Q63HM2 1172 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 ARHGAP27Q6ZUM4 889 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 NLRP9Q7RTR0 991 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 C1orf54Q8WWF1 131 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 CNDP1Q96KN2 507 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 SERPINB12Q96P63 405 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 TRIM51Q9BSJ1 452 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 PCIF1Q9H4Z3 704 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 BFARQ9NZS9 450 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 ARHGEF37A1IGU5 675 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 hCG_1984214I3L0E3 225 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 TRIM24O15164 1050 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 POLR2MP0CAP2 368 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 KBTBD12Q3ZCT8 623 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 FBXO11Q86XK2 927 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 SCUBE1Q8IWY4 988 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 ZNF713Q8N859 430 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 GLG1Q92896 1179 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 PHF21AQ96BD5 680 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 DBNDD1Q9H9R9 158 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 MBD2Q9UBB5 411 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 SFMBT1Q9UHJ3 866 aa13.84□□□□□ -0.19
PCDHGA3-201ENST00000253812 RGS5O15539 181 aa13.83□□□□□ -0.19
PCDHGA3-201ENST00000253812 FTLP02792 175 aaPredicted RBP13.83□□□□□ -0.19
PCDHGA3-201ENST00000253812 S100A1P23297 94 aa13.83□□□□□ -0.19
PCDHGA3-201ENST00000253812 C9orf72Q96LT7 481 aa13.83□□□□□ -0.19
PCDHGA3-201ENST00000253812 ERP44Q9BS26 406 aa13.83□□□□□ -0.19
PCDHGA3-201ENST00000253812 FAM129AQ9BZQ8 928 aa13.83□□□□□ -0.19
PCDHGA3-201ENST00000253812 EML4Q9HC35 981 aaKnown RBP13.83□□□□□ -0.19
PCDHGA3-201ENST00000253812 MRPL11Q9Y3B7 192 aaKnown RBP13.83□□□□□ -0.19
PCDHGA3-201ENST00000253812 SNX2O60749 519 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 ATP4AP20648 1035 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 PTPN4P29074 926 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 MCAMP43121 646 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 GJA8P48165 433 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 CERKLQ49MI3 558 aaPredicted RBP13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 NAALADL2Q58DX5 795 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 BARGINQ6ZT62 677 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 TMEM35BQ8NCS4 154 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 SNX19Q92543 992 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 NUP85Q9BW27 656 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 WDR11Q9BZH6 1224 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 NOL6Q9H6R4 1146 aaKnown RBP13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 OLA1Q9NTK5 396 aaKnown RBP13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 KLHL20Q9Y2M5 609 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 PCDHA1Q9Y5I3 950 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 KIDINS220Q9ULH0 1771 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 LOC100653049A0A140TA62 436 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 KRT34O76011 436 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 USP1O94782 785 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 FAM58BPP0C7Q3 252 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 SLC18A3Q16572 532 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 CEP44Q9C0F1 390 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 MANSC1Q9H8J5 431 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 RIMBP3CA6NJZ7 1639 aa13.83□□□□□ -0.2
PCDHGA3-201ENST00000253812 RIMBP3BA6NNM3 1639 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms