RNA–Protein interactions for RNA: ENST00000253807.2

PCDHAC1-201, Transcript of protocadherin alpha subfamily C, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHAC1, Length 5,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1-201ENST00000253807 CARD9Q9H257 536 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 GGA3Q9NZ52 723 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 ZFP69BQ9UJL9 534 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 PPP1R9AQ9ULJ8 1098 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 GYG2O15488 501 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 GH1P01241 217 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 HSPA8P11142 646 aaKnown RBP13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 PRLRP16471 622 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 PON1P27169 355 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 GCKP35557 465 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 GIT2Q14161 759 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 GTF3C2Q8WUA4 911 aaPredicted RBP13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 VPS11Q9H270 941 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 FBXO28Q9NVF7 368 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 CDH16O75309 829 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 CHEK2O96017 543 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 DPEP1P16444 411 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 TMEM132DQ14C87 1099 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 TAF11Q15544 211 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 FSCBQ5H9T9 825 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 HP1BP3Q5SSJ5 553 aaPredicted RBP13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 RASIP1Q5U651 963 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 C1orf228Q6PIY5 440 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 TRIM65Q6PJ69 517 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 OR6J1Q8NGC5 347 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 PPWD1Q96BP3 646 aaKnown RBP13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 SMARCAL1Q9NZC9 954 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 TMX2Q9Y320 296 aa13.13□□□□□ -0.31
PCDHAC1-201ENST00000253807 PI4K2BG5E9Z4 385 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 MAP3K7O43318 606 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 PLEKP08567 350 aaPredicted RBP13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 CYP2C19P33261 490 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 COPS2P61201 443 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 MDM2Q00987 491 aaPredicted RBP13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 SLC15A2Q16348 729 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 AGBL2Q5U5Z8 902 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 ILDR1Q86SU0 546 aaPredicted RBP13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 ZC3H18Q86VM9 953 aaKnown RBP13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 MAGEB5Q9BZ81 275 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 IL17RBQ9NRM6 502 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 NOP53Q9NZM5 478 aaKnown RBP13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 GTF3C4Q9UKN8 822 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 POLRMTO00411 1230 aaKnown RBP13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 HAUS5O94927 633 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 HSP90AA5PQ58FG0 334 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 TRIM67Q6ZTA4 783 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 C3orf67Q6ZVT6 689 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 TPCN2Q8NHX9 752 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 CYTH2Q99418 400 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 ERP44Q9BS26 406 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 A0A087X0T9 212 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 FAM228BP0C875 321 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 PDGFRAP16234 1089 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 LRRC14Q15048 493 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 OSBPL8Q9BZF1 889 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 EPN3Q9H201 632 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 PPCSQ9HAB8 311 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 PRMT7Q9NVM4 692 aaPredicted RBP13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 G3BP2Q9UN86 482 aaKnown RBP13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 MYOM1P52179 1685 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 CARSP49589 748 aaKnown RBP13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 ARFIP2P53365 341 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 AP1B1Q10567 949 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 RBM15Q96T37 977 aaKnown RBP eCLIP13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 MYCBPQ99417 103 aaPredicted RBP13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 NIF3L1Q9GZT8 377 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 PPP1R12AO14974 1030 aaPredicted RBP13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 CHUKO15111 745 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 HBP1O60381 514 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 ATF7IP2Q5U623 682 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 GJB7Q6PEY0 223 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 URGCPQ8TCY9 931 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 SMG5Q9UPR3 1016 aaKnown RBP13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 SNX9Q9Y5X1 595 aa13.12□□□□□ -0.31
PCDHAC1-201ENST00000253807 SPDYE2BA6NHP3 402 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 RSPH10B2B2RC85 870 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 RSPH10BP0C881 870 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 SPDYE6P0CI01 402 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 MMP14P50281 582 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 NME3Q13232 169 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 BIRC2Q13490 618 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 P3H1Q32P28 736 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 MCEEQ96PE7 176 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 UBN1Q9NPG3 1134 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 FNDC3AQ9Y2H6 1198 aaKnown RBP13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 SNAPC2Q13487 334 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 MFSD14CQ5VZR4 134 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 COL23A1Q86Y22 540 aaPredicted RBP13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 TFR2Q9UP52 801 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 PIN4Q9Y237 131 aaKnown RBP13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 CENPCQ03188 943 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 PAPD7Q5XG87 772 aaKnown RBP13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 NUDCD3Q8IVD9 361 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 SH2D3CQ8N5H7 860 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 SCFD2Q8WU76 684 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 FAM163AQ96GL9 167 aaPredicted RBP13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 FAM129AQ9BZQ8 928 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 KIF9Q9HAQ2 790 aa13.11□□□□□ -0.31
PCDHAC1-201ENST00000253807 CFAP69A5D8W1 941 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms