RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 FKBP1CQ5VVH2 108 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 SPOPLQ6IQ16 392 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 PRUNE1Q86TP1 453 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 LARGE2Q8N3Y3 721 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 ARFGAP2Q8N6H7 521 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 MTMR14Q8NCE2 650 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 CCT6BQ92526 530 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 WNT8AQ9H1J5 351 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 RAB20Q9NX57 234 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 NEU2Q9Y3R4 380 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 CEP83Q9Y592 693 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 SIP14410 1827 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 UMODL1Q5DID0 1318 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 CETPP11597 493 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 RRM1P23921 792 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 GCKP35557 465 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 MTMR2Q13614 643 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 CLEC16AQ2KHT3 1053 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 ZBTB41Q5SVQ8 909 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 FAM228AQ86W67 206 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 CPA5Q8WXQ8 436 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 RMDN3Q96TC7 470 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 NTPCRQ9BSD7 190 aaKnown RBP10.82□□□□□ -0.68
COPB1-201ENST00000249923 FAM167BQ9BTA0 163 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 LRRC19Q9H756 370 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 TESPA1A2RU30 521 aaPredicted RBP10.81□□□□□ -0.68
COPB1-201ENST00000249923 CTNND1O60716 968 aaKnown RBP10.81□□□□□ -0.68
COPB1-201ENST00000249923 VPS41P49754 854 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 EIF3BP55884 814 aaKnown RBP10.81□□□□□ -0.68
COPB1-201ENST00000249923 CXCL9Q07325 125 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 ADCY2Q08462 1091 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 SNX1Q13596 522 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 DENND2CQ68D51 928 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 RNF207Q6ZRF8 634 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 CACNA2D3Q8IZS8 1091 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 FBXL13Q8NEE6 735 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 TBC1D22BQ9NU19 505 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 FSCN2O14926 492 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 WDR46O15213 610 aaKnown RBP10.81□□□□□ -0.68
COPB1-201ENST00000249923 GJB6O95452 261 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 TCF4P15884 667 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 KCNA2P16389 499 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 MYO1EQ12965 1108 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 MPP2Q14168 576 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 SNCBQ16143 134 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 LONRF1Q17RB8 773 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 ACAD10Q6JQN1 1059 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 EXOC3L1Q86VI1 746 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 CCDC60Q8IWA6 550 aaPredicted RBP10.81□□□□□ -0.68
COPB1-201ENST00000249923 OGFOD1Q8N543 542 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 KCNV2Q8TDN2 545 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 DDX27Q96GQ7 796 aaKnown RBP10.81□□□□□ -0.68
COPB1-201ENST00000249923 ADAM33Q9BZ11 813 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 CDC42EP4Q9H3Q1 356 aaKnown RBP10.81□□□□□ -0.68
COPB1-201ENST00000249923 ZNF541Q9H0D2 1346 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 SPOPO43791 374 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 VNN1O95497 513 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 DSG3P32926 999 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 MFAP3P55082 362 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 FSTL1Q12841 308 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 LRRC14Q15048 493 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 CRELD2Q6UXH1 353 aaPredicted RBP10.81□□□□□ -0.68
COPB1-201ENST00000249923 SPATS2Q86XZ4 545 aaKnown RBP10.81□□□□□ -0.68
COPB1-201ENST00000249923 FMNL3Q8IVF7 1028 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 CCDC105Q8IYK2 499 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 REPS2Q8NFH8 660 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 ATG4CQ96DT6 458 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 PRMT1Q99873 361 aaKnown RBP10.81□□□□□ -0.68
COPB1-201ENST00000249923 KIAA1683Q9H0B3 1180 aa10.81□□□□□ -0.68
COPB1-201ENST00000249923 APOBEC3GQ9HC16 384 aaKnown RBP10.81□□□□□ -0.68
COPB1-201ENST00000249923 DNAH12Q6ZR08 3092 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 PHIPQ8WWQ0 1821 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 WDR64B1ANS9 1081 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 ACO1P21399 889 aaKnown RBP10.8□□□□□ -0.68
COPB1-201ENST00000249923 SP2Q02086 613 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 KLF1Q13351 362 aaPredicted RBP10.8□□□□□ -0.68
COPB1-201ENST00000249923 TRIP13Q15645 432 aaPredicted RBP10.8□□□□□ -0.68
COPB1-201ENST00000249923 TMEM63BQ5T3F8 832 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 SEL1L2Q5TEA6 688 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 TDRD10Q5VZ19 366 aaKnown RBP10.8□□□□□ -0.68
COPB1-201ENST00000249923 LRRC34Q8IZ02 419 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 C3orf20Q8ND61 904 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 SUPT20HQ8NEM7 779 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 SLCO2A1Q92959 643 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 CENPTQ96BT3 561 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 CHMP6Q96FZ7 201 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 FAM213AQ9BRX8 229 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 GABBR1Q9UBS5 961 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 CNOT7Q9UIV1 285 aaKnown RBP10.8□□□□□ -0.68
COPB1-201ENST00000249923 ANAPC7Q9UJX3 599 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 VWA5AO00534 786 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 RARGP13631 454 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 ATP4AP20648 1035 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 PAX7P23759 505 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 SSR1P43307 286 aaKnown RBP10.8□□□□□ -0.68
COPB1-201ENST00000249923 PDE6CP51160 858 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 KRT17Q04695 432 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 CETN1Q12798 172 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 BAATQ14032 418 aaPredicted RBP10.8□□□□□ -0.68
COPB1-201ENST00000249923 PPP2R5EQ16537 467 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms