RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 DEPTORQ8TB45 409 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 PORCNQ9H237 461 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 APOBEC3GQ9HC16 384 aaKnown RBP18.6■□□□□ 0.57
LRFN3-201ENST00000246529 FBXO40Q9UH90 709 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 MYPNQ86TC9 1320 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 TTLL13PA6NNM8 815 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 RWDD2BP57060 319 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 DRP2Q13474 957 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 EMC10Q5UCC4 262 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 CCDC105Q8IYK2 499 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 R3HDMLQ9H3Y0 253 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 RBAKQ9NYW8 714 aaPredicted RBP18.59■□□□□ 0.57
LRFN3-201ENST00000246529 K7ERI5 159 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 SCP2P22307 547 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 TMOD1P28289 359 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 MAPK4P31152 587 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 CLUL1Q15846 466 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 WDR44Q5JSH3 913 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 EEPD1Q7L9B9 569 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 MCOLN2Q8IZK6 566 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 MORC4Q8TE76 937 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 C1orf54Q8WWF1 131 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 CYFIP2Q96F07 1278 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 PCYT2Q99447 389 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 DHX33Q9H6R0 707 aaKnown RBP18.59■□□□□ 0.57
LRFN3-201ENST00000246529 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.59■□□□□ 0.57
LRFN3-201ENST00000246529 BTBD7Q9P203 1132 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 PCYOX1Q9UHG3 505 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 RASAL2Q9UJF2 1139 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 UMODL1Q5DID0 1318 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 MROH7Q68CQ1 1323 aa18.59■□□□□ 0.57
LRFN3-201ENST00000246529 STAM2O75886 525 aa18.58■□□□□ 0.57
LRFN3-201ENST00000246529 UBA1P22314 1058 aaKnown RBP18.58■□□□□ 0.57
LRFN3-201ENST00000246529 COILP38432 576 aaPredicted RBP18.58■□□□□ 0.57
LRFN3-201ENST00000246529 CLDN10P78369 228 aa18.58■□□□□ 0.57
LRFN3-201ENST00000246529 IFFO1Q0D2I5 559 aa18.58■□□□□ 0.57
LRFN3-201ENST00000246529 SNX1Q13596 522 aa18.58■□□□□ 0.57
LRFN3-201ENST00000246529 PTGISQ16647 500 aa18.58■□□□□ 0.57
LRFN3-201ENST00000246529 ODF2Q5BJF6 829 aa18.58■□□□□ 0.57
LRFN3-201ENST00000246529 OR5B17Q8NGF7 314 aa18.58■□□□□ 0.57
LRFN3-201ENST00000246529 UHMK1Q8TAS1 419 aaKnown RBP18.58■□□□□ 0.57
LRFN3-201ENST00000246529 BRCA1P38398 1863 aaKnown RBP18.58■□□□□ 0.56
LRFN3-201ENST00000246529 ZNFX1Q9P2E3 1918 aaKnown RBP18.58■□□□□ 0.56
LRFN3-201ENST00000246529 ATG7O95352 703 aa18.58■□□□□ 0.56
LRFN3-201ENST00000246529 HSPA6P17066 643 aa18.58■□□□□ 0.56
LRFN3-201ENST00000246529 PMS2P54278 862 aa18.58■□□□□ 0.56
LRFN3-201ENST00000246529 MAGOHP61326 146 aaKnown RBP18.58■□□□□ 0.56
LRFN3-201ENST00000246529 RUFY4Q6ZNE9 571 aa18.58■□□□□ 0.56
LRFN3-201ENST00000246529 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.58■□□□□ 0.56
LRFN3-201ENST00000246529 RNF25Q96BH1 459 aaPredicted RBP18.58■□□□□ 0.56
LRFN3-201ENST00000246529 CEP89Q96ST8 783 aa18.58■□□□□ 0.56
LRFN3-201ENST00000246529 HERPUD2Q9BSE4 406 aa18.58■□□□□ 0.56
LRFN3-201ENST00000246529 MSTO1Q9BUK6 570 aa18.58■□□□□ 0.56
LRFN3-201ENST00000246529 MTFR1LQ9H019 292 aa18.58■□□□□ 0.56
LRFN3-201ENST00000246529 GPRC5DQ9NZD1 345 aa18.58■□□□□ 0.56
LRFN3-201ENST00000246529 O00370 1275 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 EBAG9O00559 213 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 ZC3H11AO75152 810 aaKnown RBP eCLIP18.57■□□□□ 0.56
LRFN3-201ENST00000246529 ARL2P36404 184 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 ALDH5A1P51649 535 aaPredicted RBP18.57■□□□□ 0.56
LRFN3-201ENST00000246529 ENOSF1Q7L5Y1 443 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 SLC7A3Q8WY07 619 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 FAM107BQ9H098 131 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 PCDHB2Q9Y5E7 798 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 STYXL1Q9Y6J8 313 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 GSTTP1A0A1W2PQM5 241 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 H0YCG3 227 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 USP2O75604 605 aaPredicted RBP18.57■□□□□ 0.56
LRFN3-201ENST00000246529 GGPS1O95749 300 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 ACO1P21399 889 aaKnown RBP18.57■□□□□ 0.56
LRFN3-201ENST00000246529 NAMPTP43490 491 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 VGLL4Q14135 290 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 ATG4AQ8WYN0 398 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 EPN3Q9H201 632 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 PPANQ9NQ55 473 aaKnown RBP18.57■□□□□ 0.56
LRFN3-201ENST00000246529 MTUS1Q9ULD2 1270 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 SNCAIPQ9Y6H5 919 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 LTBP3Q9NS15 1303 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 LCTP09848 1927 aa18.57■□□□□ 0.56
LRFN3-201ENST00000246529 SMIM23A6NLE4 172 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 CAND2O75155 1236 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 ERLIN2O94905 339 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 CORO7P57737 925 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 TMEM270Q6UE05 265 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 NLGN2Q8NFZ4 835 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 SEMA4AQ9H3S1 761 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 KIAA1586Q9HCI6 787 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 SLC12A6Q9UHW9 1150 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 PCDHB4Q9Y5E5 795 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 GJB6O95452 261 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 FGFR4P22455 802 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 ICAM3P32942 547 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 DRG2P55039 364 aaKnown RBP18.56■□□□□ 0.56
LRFN3-201ENST00000246529 CUL2Q13617 745 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 CAPSQ13938 189 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 CYP1B1Q16678 543 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 C11orf70Q9BRQ4 267 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 NUB1Q9Y5A7 615 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 FAM169AQ9Y6X4 670 aa18.56■□□□□ 0.56
LRFN3-201ENST00000246529 SOWAHBA6NEL2 793 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms