RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 GDF6Q6KF10 455 aaPredicted RBP20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 SESTD1Q86VW0 696 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 CEP120Q8N960 986 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 ACAP3Q96P50 834 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 IFIH1Q9BYX4 1025 aaKnown RBP20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 CELF4Q9BZC1 486 aaKnown RBP20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 TSGA10Q9BZW7 698 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 B4GALT4O60513 344 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 LRRN2O75325 713 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 LCA5LO95447 670 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 CXCL8P10145 99 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 USP8P40818 1118 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 ETF1P62495 437 aaKnown RBP20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 TFAMQ00059 246 aaKnown RBP20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 PTK2Q05397 1052 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 GFPT1Q06210 699 aaPredicted RBP20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 PTPRJQ12913 1337 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 TRPC3Q13507 836 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 SLC27A1Q6PCB7 646 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 OR5B17Q8NGF7 314 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 JAKMIP2Q96AA8 810 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 CCDC94Q9BW85 323 aaPredicted RBP20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 TRIM6Q9C030 488 aaPredicted RBP20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 REXO2Q9Y3B8 237 aaKnown RBP20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 PAXBP1Q9Y5B6 917 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 PCDHA13Q9Y5I0 950 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 MOXD2PA6NHM9 499 aa20.18■□□□□ 0.82
TNFSF9-201ENST00000245817 FOXN3O00409 490 aaPredicted RBP20.18■□□□□ 0.82
TNFSF9-201ENST00000245817 MAGEA1P43355 309 aa20.18■□□□□ 0.82
TNFSF9-201ENST00000245817 GNG11P61952 73 aa20.18■□□□□ 0.82
TNFSF9-201ENST00000245817 MRPS6P82932 125 aaKnown RBP20.18■□□□□ 0.82
TNFSF9-201ENST00000245817 KIF5AQ12840 1032 aa20.18■□□□□ 0.82
TNFSF9-201ENST00000245817 NCOA4Q13772 614 aa20.18■□□□□ 0.82
TNFSF9-201ENST00000245817 SLC18A3Q16572 532 aa20.18■□□□□ 0.82
TNFSF9-201ENST00000245817 ASTE1Q2TB18 679 aaPredicted RBP20.18■□□□□ 0.82
TNFSF9-201ENST00000245817 CCDC122Q5T0U0 273 aa20.18■□□□□ 0.82
TNFSF9-201ENST00000245817 SYT10Q6XYQ8 523 aa20.18■□□□□ 0.82
TNFSF9-201ENST00000245817 GLT1D1Q96MS3 346 aa20.18■□□□□ 0.82
TNFSF9-201ENST00000245817 PI4K2AQ9BTU6 479 aa20.18■□□□□ 0.82
TNFSF9-201ENST00000245817 ADAMTS1Q9UHI8 967 aa20.18■□□□□ 0.82
TNFSF9-201ENST00000245817 NOD1Q9Y239 953 aa20.18■□□□□ 0.82
TNFSF9-201ENST00000245817 HTTP42858 3142 aa20.17■□□□□ 0.82
TNFSF9-201ENST00000245817 NPTXRO95502 500 aa20.17■□□□□ 0.82
TNFSF9-201ENST00000245817 PNMA6AP0CW24 399 aaPredicted RBP20.17■□□□□ 0.82
TNFSF9-201ENST00000245817 VAV2P52735 878 aa20.17■□□□□ 0.82
TNFSF9-201ENST00000245817 ACLYP53396 1101 aa20.17■□□□□ 0.82
TNFSF9-201ENST00000245817 GCNT1Q02742 428 aa20.17■□□□□ 0.82
TNFSF9-201ENST00000245817 PTGISQ16647 500 aa20.17■□□□□ 0.82
TNFSF9-201ENST00000245817 TRAPPC11Q7Z392 1133 aa20.17■□□□□ 0.82
TNFSF9-201ENST00000245817 ARRDC4Q8NCT1 418 aa20.17■□□□□ 0.82
TNFSF9-201ENST00000245817 HELQQ8TDG4 1101 aa20.17■□□□□ 0.82
TNFSF9-201ENST00000245817 SH3TC2Q8TF17 1288 aa20.17■□□□□ 0.82
TNFSF9-201ENST00000245817 TSEN34Q9BSV6 310 aaKnown RBP20.17■□□□□ 0.82
TNFSF9-201ENST00000245817 MTMR12Q9C0I1 747 aa20.17■□□□□ 0.82
TNFSF9-201ENST00000245817 GPR88Q9GZN0 384 aa20.17■□□□□ 0.82
TNFSF9-201ENST00000245817 ASB7Q9H672 318 aa20.17■□□□□ 0.82
TNFSF9-201ENST00000245817 PIN4Q9Y237 131 aaKnown RBP20.17■□□□□ 0.82
TNFSF9-201ENST00000245817 TRPV2Q9Y5S1 764 aa20.17■□□□□ 0.82
TNFSF9-201ENST00000245817 VNN1O95497 513 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 HOXA11P31270 313 aaPredicted RBP20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 GRM5P41594 1212 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 YARSP54577 528 aaKnown RBP20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 ITGA7Q13683 1181 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 C10orf76Q5T2E6 689 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 ZNF662Q6ZS27 426 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 ZNF571Q7Z3V5 609 aaPredicted RBP20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 SERINC5Q86VE9 423 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 CD302Q8IX05 232 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 TMEM192Q8IY95 271 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 TATDN2Q93075 761 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 FAM84AQ96KN4 292 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 DNAI1Q9UI46 699 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 GUCA1BQ9UMX6 200 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 R3HCC1Q9Y3T6 440 aaKnown RBP20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 MROH7Q68CQ1 1323 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 LACTBL1A8MY62 500 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 RBAK-RBAKDNI3L0D1 243 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 PTPN11Q06124 597 aaPredicted RBP20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 BMS1Q14692 1282 aaKnown RBP20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 TMEM40Q8WWA1 233 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 KAT5Q92993 513 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 KREMEN1Q96MU8 473 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 CDY2AQ9Y6F7 541 aa20.16■□□□□ 0.82
TNFSF9-201ENST00000245817 ZNF263O14978 683 aa20.15■□□□□ 0.82
TNFSF9-201ENST00000245817 TBXAS1P24557 533 aaPredicted RBP20.15■□□□□ 0.82
TNFSF9-201ENST00000245817 CASQ1P31415 396 aa20.15■□□□□ 0.82
TNFSF9-201ENST00000245817 SGSM1Q2NKQ1 1148 aa20.15■□□□□ 0.82
TNFSF9-201ENST00000245817 SHC3Q92529 594 aa20.15■□□□□ 0.82
TNFSF9-201ENST00000245817 MYO1AQ9UBC5 1043 aa20.15■□□□□ 0.82
TNFSF9-201ENST00000245817 SCN10AQ9Y5Y9 1956 aa20.14■□□□□ 0.82
TNFSF9-201ENST00000245817 A0A087X0T9 212 aa20.14■□□□□ 0.81
TNFSF9-201ENST00000245817 A0A0U1RQJ8 604 aa20.14■□□□□ 0.81
TNFSF9-201ENST00000245817 FAM228BP0C875 321 aa20.14■□□□□ 0.81
TNFSF9-201ENST00000245817 TNFAIP3P21580 790 aa20.14■□□□□ 0.81
TNFSF9-201ENST00000245817 NOP14P78316 857 aaKnown RBP20.14■□□□□ 0.81
TNFSF9-201ENST00000245817 LHX8Q68G74 356 aa20.14■□□□□ 0.81
TNFSF9-201ENST00000245817 RPAINQ86UA6 219 aa20.14■□□□□ 0.81
TNFSF9-201ENST00000245817 FAM71AQ8IYT1 594 aa20.14■□□□□ 0.81
TNFSF9-201ENST00000245817 ATRIPQ8WXE1 791 aa20.14■□□□□ 0.81
TNFSF9-201ENST00000245817 PLEKHA5Q9HAU0 1116 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms