RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 CRAMP1Q96RY5 1269 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 C7orf25Q9BPX7 421 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 IER2Q9BTL4 223 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 TMEM60Q9H2L4 133 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 MRPL44Q9H9J2 332 aaKnown RBP8.71□□□□□ -1.02
CXCR4-201ENST00000241393 ZNF446Q9NWS9 450 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 SEC63Q9UGP8 760 aaKnown RBP8.71□□□□□ -1.02
CXCR4-201ENST00000241393 TCFL5Q9UL49 500 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 STX8Q9UNK0 236 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 PLAGL2Q9UPG8 496 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 PLAAQ9Y263 795 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 PRKAB1Q9Y478 270 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 BACE2Q9Y5Z0 518 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 SHISA3A0PJX4 238 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 KLRG2A4D1S0 409 aaPredicted RBP8.7□□□□□ -1.02
CXCR4-201ENST00000241393 ADAMTS3O15072 1205 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 UFL1O94874 794 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 TUBBP07437 444 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 VAV1P15498 845 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 DNM2P50570 870 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 ASPRV1Q53RT3 343 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 PRSS36Q5K4E3 855 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 EEF1DP3Q658K8 133 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 TTI2Q6NXR4 508 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 FOXR2Q6PJQ5 311 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 CRTC3Q6UUV7 619 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 NEK8Q86SG6 692 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 CABP7Q86V35 215 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 AMIGO3Q86WK7 504 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 IRF2BP1Q8IU81 584 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 CREG2Q8IUH2 290 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 MAPKAPK5Q8IW41 473 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 RASSF8Q8NHQ8 419 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 STAMQ92783 540 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 CCDC120Q96HB5 630 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 DESI2Q9BSY9 194 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 NUP58Q9BVL2 599 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 RIOX1Q9H6W3 641 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 MAGEC2Q9UBF1 373 aaPredicted RBP8.7□□□□□ -1.02
CXCR4-201ENST00000241393 CDC23Q9UJX2 597 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 JAG2Q9Y219 1238 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 GDAQ9Y2T3 454 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 GPR55Q9Y2T6 319 aaPredicted RBP8.7□□□□□ -1.02
CXCR4-201ENST00000241393 MRPS23Q9Y3D9 190 aaKnown RBP8.7□□□□□ -1.02
CXCR4-201ENST00000241393 CDK5RAP2Q96SN8 1893 aa8.7□□□□□ -1.02
CXCR4-201ENST00000241393 SMCO2A6NFE2 343 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 ZNF205O95201 554 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 ASMTLO95671 621 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 NAT1P18440 290 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 CCNE1P24864 410 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 KRT9P35527 623 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 CCT6AP40227 531 aaKnown RBP8.69□□□□□ -1.02
CXCR4-201ENST00000241393 MTF1Q14872 753 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 AOC3Q16853 763 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 DPY19L1Q2PZI1 675 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 GAB4Q2WGN9 574 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 FIGNQ5HY92 759 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 IQCEQ6IPM2 695 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 CNNM4Q6P4Q7 775 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 SRGAP1Q7Z6B7 1085 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 MB21D1Q8N884 522 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 SLC44A5Q8NCS7 719 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 OR8K1Q8NGG5 319 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 NUP88Q99567 741 aaPredicted RBP8.69□□□□□ -1.02
CXCR4-201ENST00000241393 MRPL4Q9BYD3 311 aaKnown RBP8.69□□□□□ -1.02
CXCR4-201ENST00000241393 TRIM9Q9C026 710 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 VPS16Q9H269 839 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 SEMA3GQ9NS98 782 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 TAB2Q9NYJ8 693 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 LMCD1Q9NZU5 365 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 PRDM4Q9UKN5 801 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 LRRC37AA6NMS7 1700 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 ABCB11O95342 1321 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 PVALEFA0A1B0GWK0 134 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 CTAGE9A4FU28 777 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 ANKRD62A6NC57 917 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 PLD2O14939 933 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 SLC26A4O43511 780 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 EFCAB14O75071 495 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 SCG5P05408 212 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 FURINP09958 794 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 PNMA6AP0CW24 399 aaPredicted RBP8.69□□□□□ -1.02
CXCR4-201ENST00000241393 SNHG28P0DPA3 235 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 SRGNP10124 158 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 UBXN1Q04323 297 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 GABPAQ06546 454 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 BRD3Q15059 726 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 WHAMMP3Q1A5X7 153 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 MFSD14BQ5SR56 506 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 NAT16Q8N8M0 369 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 P2RX5Q93086 422 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 CALML4Q96GE6 196 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 RAB34Q9BZG1 259 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 LRRC27Q9C0I9 530 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 EXOC1Q9NV70 894 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 SAP30BPQ9UHR5 308 aaKnown RBP8.69□□□□□ -1.02
CXCR4-201ENST00000241393 CAPN11Q9UMQ6 739 aa8.69□□□□□ -1.02
CXCR4-201ENST00000241393 FOCADQ5VW36 1801 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 LTBP1Q14766 1721 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 IGKV6D-41A0A0C4DH26 115 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms