RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 RALBP11234 206 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 PSMA3P25788 255 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 NNMTP40261 264 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 PEX3P56589 373 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 ACTR2P61160 394 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 UBE2SQ16763 222 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 SLC44A4Q53GD3 710 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 THEMIS2Q5TEJ8 643 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 ZNF560Q96MR9 790 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 FOPNLQ96NB1 174 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 LXNQ9BS40 222 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 MTO1Q9Y2Z2 717 aaKnown RBP7.1□□□□□ -1.27
CSMD2-201ENST00000241312 SESN1Q9Y6P5 492 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 A0A1B0GTH6 734 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 USP17L5A8MUK1 530 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 POTECB2RU33 542 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 ATP1A1P05023 1023 aaKnown RBP7.1□□□□□ -1.27
CSMD2-201ENST00000241312 GNAT1P11488 350 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 ACADSP16219 412 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 VCPP55072 806 aaKnown RBP7.1□□□□□ -1.27
CSMD2-201ENST00000241312 VSNL1P62760 191 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 DYNLL1P63167 89 aaKnown RBP7.1□□□□□ -1.27
CSMD2-201ENST00000241312 TRIM16LQ309B1 348 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 EFL1Q7Z2Z2 1120 aaKnown RBP7.1□□□□□ -1.27
CSMD2-201ENST00000241312 URGCPQ8TCY9 931 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 STMN3Q9NZ72 180 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 DCDC2Q9UHG0 476 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 SNX12Q9UMY4 172 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 USP6P35125 1406 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 ORC4O43929 436 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 TRIP10Q15642 601 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 AGBL2Q5U5Z8 902 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 LONP2Q86WA8 852 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 RCOR2Q8IZ40 523 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 TADA1Q96BN2 335 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 TMEM161AQ9NX61 479 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 KCND2Q9NZV8 630 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 DFFAO00273 331 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 PPP4R4Q6NUP7 873 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 GLYCTKQ8IVS8 523 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 THNSL1Q8IYQ7 743 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 USE1Q9NZ43 259 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 POTEFA5A3E0 1075 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 AKAP10O43572 662 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 POTEIP0CG38 1075 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 CCDC15Q0P6D6 951 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 POTEGQ6S5H5 508 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 POTEEQ6S8J3 1075 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 VPS9D1Q9Y2B5 631 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 MCAMP43121 646 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 CLK1P49759 484 aaKnown RBP7.09□□□□□ -1.27
CSMD2-201ENST00000241312 GJC2Q5T442 439 aaPredicted RBP7.09□□□□□ -1.27
CSMD2-201ENST00000241312 ZNF746Q6NUN9 644 aaPredicted RBP7.09□□□□□ -1.27
CSMD2-201ENST00000241312 OTULINQ96BN8 352 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 POLD4Q9HCU8 107 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 SLAIN2Q9P270 581 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 CAB39Q9Y376 341 aaPredicted RBP7.09□□□□□ -1.27
CSMD2-201ENST00000241312 CAMSAP1Q5T5Y3 1602 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 BLVRAP53004 296 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 FMR1NBQ8N0W7 255 aaPredicted RBP7.09□□□□□ -1.27
CSMD2-201ENST00000241312 FAM162AQ96A26 154 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 CNDP1Q96KN2 507 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 CNBD2Q96M20 576 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 ZFP42Q96MM3 310 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 IQGAP3Q86VI3 1631 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 CLASP2O75122 1294 aaKnown RBP7.09□□□□□ -1.27
CSMD2-201ENST00000241312 ZNF211Q13398 564 aaPredicted RBP7.09□□□□□ -1.27
CSMD2-201ENST00000241312 RNF25Q96BH1 459 aaPredicted RBP7.09□□□□□ -1.27
CSMD2-201ENST00000241312 RBBP8Q99708 897 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 DDX50Q9BQ39 737 aaKnown RBP7.09□□□□□ -1.27
CSMD2-201ENST00000241312 DHX35Q9H5Z1 703 aaKnown RBP7.09□□□□□ -1.27
CSMD2-201ENST00000241312 FEM1BQ9UK73 627 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 FAM186AA6NE01 2351 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 TPI1P60174 286 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 NSUN6Q8TEA1 469 aaKnown RBP7.09□□□□□ -1.27
CSMD2-201ENST00000241312 HSPBP1Q9NZL4 362 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 SLC16A4O15374 487 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 TOB2Q14106 344 aaPredicted RBP7.09□□□□□ -1.27
CSMD2-201ENST00000241312 NECTIN1Q15223 517 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 PDLIM2Q96JY6 352 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 MRPL4Q9BYD3 311 aaKnown RBP7.09□□□□□ -1.27
CSMD2-201ENST00000241312 PRAMEF22A3QJZ6 481 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 PRPF4O43172 522 aaKnown RBP eCLIP7.09□□□□□ -1.27
CSMD2-201ENST00000241312 ADCY3O60266 1144 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 SRP72O76094 671 aaKnown RBP7.09□□□□□ -1.27
CSMD2-201ENST00000241312 SEC24DO94855 1032 aaPredicted RBP7.09□□□□□ -1.27
CSMD2-201ENST00000241312 HPCAP84074 193 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 LRRC14Q15048 493 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 WLSQ5T9L3 541 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 OLFML2BQ68BL8 750 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 MARCOQ9UEW3 520 aaPredicted RBP7.09□□□□□ -1.27
CSMD2-201ENST00000241312 RASSF9O75901 435 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 LSP1P33241 339 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 COPAP53621 1224 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 STX3Q13277 289 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 TP53BP2Q13625 1128 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 CALML6Q8TD86 181 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 NDFIP2Q9NV92 336 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 LOC102724159A0A0B4J2E5 919 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 PWP2Q15269 919 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms