RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 ANKRD20A1Q5TYW2 823 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 KCNV1Q6PIU1 500 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 ZBTB33Q86T24 672 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 NUDCD3Q8IVD9 361 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 TMEM237Q96Q45 408 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 MSTO1Q9BUK6 570 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 MOV10L1Q9BXT6 1211 aaKnown RBP11.66□□□□□ -0.54
CCDC170-201ENST00000239374 NEUROG2Q9H2A3 272 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 WHRNQ9P202 907 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 MARCOQ9UEW3 520 aaPredicted RBP11.66□□□□□ -0.54
CCDC170-201ENST00000239374 TTLL3Q9Y4R7 772 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 ZBED1O96006 694 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 NOP14P78316 857 aaKnown RBP11.66□□□□□ -0.54
CCDC170-201ENST00000239374 MCM8Q9UJA3 840 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 APOBEC2Q9Y235 224 aaKnown RBP11.66□□□□□ -0.54
CCDC170-201ENST00000239374 GTPBP10A4D1E9 387 aaKnown RBP11.66□□□□□ -0.54
CCDC170-201ENST00000239374 DCAF8L1A6NGE4 600 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 RARAP10276 462 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 VHLP40337 213 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 PDE1CQ14123 709 aaPredicted RBP11.66□□□□□ -0.54
CCDC170-201ENST00000239374 SLC30A10Q6XR72 485 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 ZNF354CQ86Y25 554 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 LARGE2Q8N3Y3 721 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 TTC13Q8NBP0 860 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 SPDYE1Q8NFV5 336 aaPredicted RBP11.66□□□□□ -0.54
CCDC170-201ENST00000239374 ATXN2LQ8WWM7 1075 aaKnown RBP11.66□□□□□ -0.54
CCDC170-201ENST00000239374 RANBP17Q9H2T7 1088 aaKnown RBP11.66□□□□□ -0.54
CCDC170-201ENST00000239374 IRAK4Q9NWZ3 460 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 AKAP12Q02952 1782 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 B2RBV5 119 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 H0YIN7 160 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 KIAA0391O15091 583 aaKnown RBP11.66□□□□□ -0.54
CCDC170-201ENST00000239374 LCA5LO95447 670 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 KRT4P19013 534 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 PRKCIP41743 596 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 OSTNP61366 133 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 KCNA1Q09470 495 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 DBN1Q16643 649 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 CDO1Q16878 200 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 IRF2BP2Q7Z5L9 587 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 ZBTB8OSQ8IWT0 167 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 CEP120Q8N960 986 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 PI4K2AQ9BTU6 479 aa11.66□□□□□ -0.54
CCDC170-201ENST00000239374 TDRD3Q9H7E2 651 aaKnown RBP11.66□□□□□ -0.54
CCDC170-201ENST00000239374 CAPN9O14815 690 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 ADAMTS3O15072 1205 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 KRT38O76015 456 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 CNGA2Q16280 664 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 ACCSLQ4AC99 568 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 ENOSF1Q7L5Y1 443 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 RASSF3Q86WH2 238 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 NME8Q8N427 588 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 RIBC1Q8N443 379 aaPredicted RBP11.65□□□□□ -0.54
CCDC170-201ENST00000239374 SCYL1Q96KG9 808 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 CTNNAL1Q9UBT7 734 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 SNX16P57768 344 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 AUHQ13825 339 aaKnown RBP11.65□□□□□ -0.54
CCDC170-201ENST00000239374 C3orf62Q6ZUJ4 267 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 DEPDC1BQ8WUY9 529 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 THTPAQ9BU02 230 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 POLR3CQ9BUI4 534 aaPredicted RBP11.65□□□□□ -0.54
CCDC170-201ENST00000239374 SLC9A2Q9UBY0 812 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 PIK3C2AO00443 1686 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 RBAK-RBAKDNI3L0D1 243 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 P4HA1P13674 534 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 YARSP54577 528 aaKnown RBP11.65□□□□□ -0.54
CCDC170-201ENST00000239374 XRCC4Q13426 336 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 TMED1Q13445 227 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 RABGAP1LQ5R372 815 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 TAS2R14Q9NYV8 317 aa11.65□□□□□ -0.54
CCDC170-201ENST00000239374 CALB1P05937 261 aa11.65□□□□□ -0.55
CCDC170-201ENST00000239374 GNAT1P11488 350 aa11.65□□□□□ -0.55
CCDC170-201ENST00000239374 ALDH18A1P54886 795 aaKnown RBP11.65□□□□□ -0.55
CCDC170-201ENST00000239374 THOC5Q13769 683 aaKnown RBP11.65□□□□□ -0.55
CCDC170-201ENST00000239374 CRELD2Q6UXH1 353 aaPredicted RBP11.65□□□□□ -0.55
CCDC170-201ENST00000239374 TRIM50Q86XT4 487 aa11.65□□□□□ -0.55
CCDC170-201ENST00000239374 NLRP7Q8WX94 980 aa11.65□□□□□ -0.55
CCDC170-201ENST00000239374 PARVAQ9NVD7 372 aa11.65□□□□□ -0.55
CCDC170-201ENST00000239374 HEY2Q9UBP5 337 aa11.65□□□□□ -0.55
CCDC170-201ENST00000239374 PNMA3Q9UL41 463 aa11.65□□□□□ -0.55
CCDC170-201ENST00000239374 HEY1Q9Y5J3 304 aa11.65□□□□□ -0.55
CCDC170-201ENST00000239374 hCG_2014768A0A024R1R8 64 aa11.64□□□□□ -0.55
CCDC170-201ENST00000239374 CUL3Q13618 768 aa11.64□□□□□ -0.55
CCDC170-201ENST00000239374 RNF168Q8IYW5 571 aaPredicted RBP11.64□□□□□ -0.55
CCDC170-201ENST00000239374 CEP70Q8NHQ1 597 aa11.64□□□□□ -0.55
CCDC170-201ENST00000239374 NSL1Q96IY1 281 aa11.64□□□□□ -0.55
CCDC170-201ENST00000239374 CBWD1Q9BRT8 395 aa11.64□□□□□ -0.55
CCDC170-201ENST00000239374 FOXP3Q9BZS1 431 aa11.64□□□□□ -0.55
CCDC170-201ENST00000239374 SMYD2Q9NRG4 433 aa11.64□□□□□ -0.55
CCDC170-201ENST00000239374 PRPSAP2O60256 369 aa11.64□□□□□ -0.55
CCDC170-201ENST00000239374 NOL4O94818 638 aa11.64□□□□□ -0.55
CCDC170-201ENST00000239374 TAF1BQ53T94 588 aaPredicted RBP11.64□□□□□ -0.55
CCDC170-201ENST00000239374 DUPD1Q68J44 220 aa11.64□□□□□ -0.55
CCDC170-201ENST00000239374 OR6B2Q6IFH4 312 aa11.64□□□□□ -0.55
CCDC170-201ENST00000239374 C11orf63Q6NUN7 778 aa11.64□□□□□ -0.55
CCDC170-201ENST00000239374 MTDHQ86UE4 582 aaKnown RBP11.64□□□□□ -0.55
CCDC170-201ENST00000239374 ARHGAP18Q8N392 663 aa11.64□□□□□ -0.55
CCDC170-201ENST00000239374 SLC5A5Q92911 643 aa11.64□□□□□ -0.55
CCDC170-201ENST00000239374 LRGUKQ96M69 825 aa11.64□□□□□ -0.55
CCDC170-201ENST00000239374 WWP1Q9H0M0 922 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms