RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 FCARP24071 287 aa10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 HOXA11P31270 313 aaPredicted RBP10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 GBP1P32455 592 aa10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 PXNP49023 591 aaPredicted RBP10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 GRIK3Q13003 919 aa10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 SLC5A9Q2M3M2 681 aa10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 CHD1LQ86WJ1 897 aa10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 CCDC82Q8N4S0 544 aa10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 SLC7A3Q8WY07 619 aa10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 EXOC4Q96A65 974 aa10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 ZFP42Q96MM3 310 aa10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 UBL7Q96S82 380 aaPredicted RBP10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 NUSAP1Q9BXS6 441 aaKnown RBP10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 DUSP15Q9H1R2 295 aaPredicted RBP10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 SLITRK6Q9H5Y7 841 aa10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 TRPV4Q9HBA0 871 aa10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 IFT122Q9HBG6 1241 aa10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 SENP2Q9HC62 589 aa10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 COL4A3BPQ9Y5P4 624 aa10.75□□□□□ -0.69
NDUFB3-201ENST00000237889 WDR27A2RRH5 827 aa10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 CAPN8A6NHC0 703 aa10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 hCG_1984214I3L0E3 225 aa10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 CDX4O14627 284 aaPredicted RBP10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 ASAP2O43150 1006 aa10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 EXTL3O43909 919 aa10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 PLEKHA8P1O95397 391 aa10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 ATXN3P54252 364 aaPredicted RBP10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 AMPD2Q01433 879 aa10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 GRSF1Q12849 480 aaKnown RBP eCLIP10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 CCINQ13939 588 aa10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 PRR16Q569H4 304 aa10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 UBXN11Q5T124 520 aa10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 KSR1Q8IVT5 923 aa10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 SMC5Q8IY18 1101 aa10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 CMTR1Q8N1G2 835 aaKnown RBP10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 HDDC3Q8N4P3 179 aa10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 ZNF713Q8N859 430 aaPredicted RBP10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 SMG8Q8ND04 991 aaKnown RBP10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 RDM1Q8NG50 284 aa10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 IGDCC4Q8TDY8 1250 aa10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 PSPC1Q8WXF1 523 aaKnown RBP10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 ZNF512Q96ME7 567 aaPredicted RBP10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 BBC3Q96PG8 261 aaPredicted RBP10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 MTA3Q9BTC8 594 aa10.74□□□□□ -0.69
NDUFB3-201ENST00000237889 COL4A3Q01955 1670 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 IGLV3-22A0A075B6J6 115 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 hCG_1642624A0A1W2PR95 340 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 DDX11L8A8MPP1 907 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 HEPACAM2A8MVW5 462 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 DPYSL4O14531 572 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 TRAPPC3O43617 180 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 GAS7O60861 476 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 CTHP32929 405 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 VIPR2P41587 438 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 NUCB1Q02818 461 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 TUSC3Q13454 348 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 PON2Q15165 354 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 USP39Q53GS9 565 aaKnown RBP10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 SYNE3Q6ZMZ3 975 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 ANKS3Q6ZW76 656 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 CYP2U1Q7Z449 544 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 CHCHD4Q8N4Q1 142 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 ZNF461Q8TAF7 563 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 ZSCAN18Q8TBC5 510 aaPredicted RBP10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 RIT2Q99578 217 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 CSRNP2Q9H175 543 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 MIOSQ9NXC5 875 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 SLC12A7Q9Y666 1083 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 CDY1Q9Y6F8 540 aa10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 SMG1Q96Q15 3661 aaKnown RBP10.73□□□□□ -0.69
NDUFB3-201ENST00000237889 IGSF10Q6WRI0 2623 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 SDK1Q7Z5N4 2213 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 SPAARA0A1B0GVQ0 90 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 ARHGEF37A1IGU5 675 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 UPK3BL1B0FP48 263 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 UPK3BL2E5RIL1 263 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 ARNTLO00327 626 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 CHMP2AO43633 222 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 DKC1O60832 514 aaKnown RBP eCLIP10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 CAPNS1P04632 268 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 DPP6P42658 865 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 IRX4P78413 519 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 PLCB2Q00722 1185 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 ARHGAP29Q52LW3 1261 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 PRSS36Q5K4E3 855 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 LSM14AQ8ND56 463 aaKnown RBP10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 TCP11Q8WWU5 503 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 PRPF31Q8WWY3 499 aaKnown RBP10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 RABGGTAQ92696 567 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 TMEM209Q96SK2 561 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 C2orf42Q9NWW7 574 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 MTRRQ9UBK8 725 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 PARP2Q9UGN5 583 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 HES2Q9Y543 173 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 PPME1Q9Y570 386 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 BACE2Q9Y5Z0 518 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 ZMYM2Q9UBW7 1377 aa10.72□□□□□ -0.69
NDUFB3-201ENST00000237889 RALGAPA1Q6GYQ0 2036 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms