RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 OR5B17Q8NGF7 314 aa9.77□□□□□ -0.84
SYDE2-201ENST00000234668 WNT8AQ9H1J5 351 aa9.77□□□□□ -0.84
SYDE2-201ENST00000234668 ADAM7Q9H2U9 754 aa9.77□□□□□ -0.84
SYDE2-201ENST00000234668 C10orf88Q9H8K7 445 aa9.77□□□□□ -0.84
SYDE2-201ENST00000234668 APOBEC3GQ9HC16 384 aaKnown RBP9.77□□□□□ -0.84
SYDE2-201ENST00000234668 MTUS1Q9ULD2 1270 aa9.77□□□□□ -0.84
SYDE2-201ENST00000234668 PCDHB4Q9Y5E5 795 aa9.77□□□□□ -0.84
SYDE2-201ENST00000234668 CD2APQ9Y5K6 639 aa9.77□□□□□ -0.84
SYDE2-201ENST00000234668 MROH7Q68CQ1 1323 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 STBD1O95210 358 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 GZMAP12544 262 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 KCNA2P16389 499 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 ATP4AP20648 1035 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 MARK3P27448 753 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 GPC3P51654 580 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 JAK3P52333 1124 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 POLGP54098 1239 aaPredicted RBP9.77□□□□□ -0.85
SYDE2-201ENST00000234668 TAS2R40P59535 323 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 OSTNP61366 133 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 BYSLQ13895 437 aaKnown RBP9.77□□□□□ -0.85
SYDE2-201ENST00000234668 CLEC16AQ2KHT3 1053 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 AGBL2Q5U5Z8 902 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 LRRC34Q8IZ02 419 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 ASAP3Q8TDY4 903 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 C9orf72Q96LT7 481 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 XPO6Q96QU8 1125 aaKnown RBP9.77□□□□□ -0.85
SYDE2-201ENST00000234668 RPS6KC1Q96S38 1066 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 CEP89Q96ST8 783 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 ELAC2Q9BQ52 826 aaKnown RBP9.77□□□□□ -0.85
SYDE2-201ENST00000234668 JPH2Q9BR39 696 aaPredicted RBP9.77□□□□□ -0.85
SYDE2-201ENST00000234668 JPH1Q9HDC5 661 aaPredicted RBP9.77□□□□□ -0.85
SYDE2-201ENST00000234668 CYP26B1Q9NR63 512 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 FBXO40Q9UH90 709 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 CNOT7Q9UIV1 285 aaKnown RBP9.77□□□□□ -0.85
SYDE2-201ENST00000234668 GTF3C4Q9UKN8 822 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 RASGRF2O14827 1237 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 TP73O15350 636 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 P4HA2O15460 535 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 RIPK2O43353 540 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 LYPLA2O95372 231 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 ECEL1O95672 775 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 ZSCAN5DPP0CG00 497 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 CCND2P30279 289 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 ADCY8P40145 1251 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 PIK3CAP42336 1068 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 MMS22LQ6ZRQ5 1243 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 C12orf56Q8IXR9 622 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 MCOLN2Q8IZK6 566 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 GDAP1Q8TB36 358 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 SPIRE2Q8WWL2 714 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 PSPC1Q8WXF1 523 aaKnown RBP9.77□□□□□ -0.85
SYDE2-201ENST00000234668 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.77□□□□□ -0.85
SYDE2-201ENST00000234668 LPAR1Q92633 364 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 THOC1Q96FV9 657 aaKnown RBP9.77□□□□□ -0.85
SYDE2-201ENST00000234668 MFSD14AQ96MC6 490 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 CAMKK2Q96RR4 588 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 TCHPQ9BT92 498 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 CDC42EP4Q9H3Q1 356 aaKnown RBP9.77□□□□□ -0.85
SYDE2-201ENST00000234668 KCNK9Q9NPC2 374 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 A1CFQ9NQ94 594 aaKnown RBP9.77□□□□□ -0.85
SYDE2-201ENST00000234668 AAASQ9NRG9 546 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 C1orf112Q9NSG2 853 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 ANKEF1Q9NU02 776 aa9.77□□□□□ -0.85
SYDE2-201ENST00000234668 MTRF1LQ9UGC7 380 aaKnown RBP9.77□□□□□ -0.85
SYDE2-201ENST00000234668 DIS3Q9Y2L1 958 aaKnown RBP9.77□□□□□ -0.85
SYDE2-201ENST00000234668 CST3P01034 146 aaPredicted RBP9.76□□□□□ -0.85
SYDE2-201ENST00000234668 ETS1P14921 441 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 RFX1P22670 979 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 FNTAP49354 379 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 MNAT1P51948 309 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 BACE1P56817 501 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 RPL7AP62424 266 aaKnown RBP9.76□□□□□ -0.85
SYDE2-201ENST00000234668 CALCOCO2Q13137 446 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 ALCAMQ13740 583 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 BRDTQ58F21 947 aaPredicted RBP9.76□□□□□ -0.85
SYDE2-201ENST00000234668 EMC10Q5UCC4 262 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 CCDC121Q6ZUS5 278 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 EIF1ADQ8N9N8 165 aaKnown RBP9.76□□□□□ -0.85
SYDE2-201ENST00000234668 GLIS1Q8NBF1 620 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 KIFAP3Q92845 792 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 TLCD1Q96CP7 247 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 IFT74Q96LB3 600 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 IWS1Q96ST2 819 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 INTS9Q9NV88 658 aaKnown RBP9.76□□□□□ -0.85
SYDE2-201ENST00000234668 SLC9A2Q9UBY0 812 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 PCYOX1Q9UHG3 505 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 VNN1O95497 513 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 TNFSF9P41273 254 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 NSFP46459 744 aaKnown RBP9.76□□□□□ -0.85
SYDE2-201ENST00000234668 ITGA8P53708 1063 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 ORC1Q13415 861 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 FKBP1CQ5VVH2 108 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 CYP4F22Q6NT55 531 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 SCARA5Q6ZMJ2 495 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 NIPA1Q7RTP0 329 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 CCDC13Q8IYE1 715 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 ZBED3Q96IU2 234 aaPredicted RBP9.76□□□□□ -0.85
SYDE2-201ENST00000234668 AGO2Q9UKV8 859 aaKnown RBP9.76□□□□□ -0.85
SYDE2-201ENST00000234668 NUB1Q9Y5A7 615 aa9.76□□□□□ -0.85
SYDE2-201ENST00000234668 MYPNQ86TC9 1320 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms