RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 HVCN1Q96D96 273 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 TMEM169Q96HH4 297 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 ASB2Q96Q27 587 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 CBWD1Q9BRT8 395 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 GZF1Q9H116 711 aaPredicted RBP14.99□□□□□ -0.01
VEGFA-201ENST00000230480 IGFLR1Q9H665 355 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 MAGEF1Q9HAY2 307 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 THEGQ9P2T0 379 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 ATP6V1DQ9Y5K8 247 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 PVALEFA0A1B0GWK0 134 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 H3BQ06 376 aaPredicted RBP14.98□□□□□ -0.01
VEGFA-201ENST00000230480 PPEF2O14830 753 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 ZNF202O95125 648 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 GCNT3O95395 438 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 CXCL14O95715 111 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 SOD2P04179 222 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 CLTAP09496 248 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 SYKP43405 635 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 ASIC1P78348 528 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 KRT17Q04695 432 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 HSP90AA2PQ14568 343 aaPredicted RBP14.98□□□□□ -0.01
VEGFA-201ENST00000230480 LEXMQ3ZCV2 418 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 KMT5BQ4FZB7 885 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 TPRNQ4KMQ1 711 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 RTP2Q5QGT7 225 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 FUT10Q6P4F1 479 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 SYCE2Q6PIF2 218 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 TMC7Q7Z402 723 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 CCDC65Q8IXS2 484 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 HACE1Q8IYU2 909 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 CXorf38Q8TB03 319 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 HASPINQ8TF76 798 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 ATXN2LQ8WWM7 1075 aaKnown RBP14.98□□□□□ -0.01
VEGFA-201ENST00000230480 KLHL5Q96PQ7 755 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 HERC2P3Q9BVR0 1158 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 CCDC94Q9BW85 323 aaPredicted RBP14.98□□□□□ -0.01
VEGFA-201ENST00000230480 RXFP1Q9HBX9 757 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 NGRNQ9NPE2 291 aaKnown RBP14.98□□□□□ -0.01
VEGFA-201ENST00000230480 TUBGCP4Q9UGJ1 667 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 COG5Q9UP83 839 aa14.98□□□□□ -0.01
VEGFA-201ENST00000230480 GRXCR2A6NFK2 248 aa14.97□□□□□ -0.01
VEGFA-201ENST00000230480 TMEM189-UBE2V1I3L0A0 370 aa14.97□□□□□ -0.01
VEGFA-201ENST00000230480 CNPP09543 421 aaKnown RBP14.97□□□□□ -0.01
VEGFA-201ENST00000230480 KCNA5P22460 613 aa14.97□□□□□ -0.01
VEGFA-201ENST00000230480 DSG1Q02413 1049 aa14.97□□□□□ -0.01
VEGFA-201ENST00000230480 BMT2Q1RMZ1 405 aa14.97□□□□□ -0.01
VEGFA-201ENST00000230480 FAM26FQ5R3K3 315 aa14.97□□□□□ -0.01
VEGFA-201ENST00000230480 PDE12Q6L8Q7 609 aaKnown RBP14.97□□□□□ -0.01
VEGFA-201ENST00000230480 KANK3Q6NY19 840 aa14.97□□□□□ -0.01
VEGFA-201ENST00000230480 RSPO2Q6UXX9 243 aaPredicted RBP14.97□□□□□ -0.01
VEGFA-201ENST00000230480 EFCAB13Q8IY85 973 aa14.97□□□□□ -0.01
VEGFA-201ENST00000230480 MICAL1Q8TDZ2 1067 aa14.97□□□□□ -0.01
VEGFA-201ENST00000230480 FAM193BQ96PV7 902 aaPredicted RBP14.97□□□□□ -0.01
VEGFA-201ENST00000230480 ACCSQ96QU6 501 aa14.97□□□□□ -0.01
VEGFA-201ENST00000230480 S1PR5Q9H228 398 aa14.97□□□□□ -0.01
VEGFA-201ENST00000230480 TLE6Q9H808 572 aa14.97□□□□□ -0.01
VEGFA-201ENST00000230480 SLC39A2Q9NP94 309 aa14.97□□□□□ -0.01
VEGFA-201ENST00000230480 CD320Q9NPF0 282 aa14.97□□□□□ -0.01
VEGFA-201ENST00000230480 CLDND1Q9NY35 253 aa14.97□□□□□ -0.01
VEGFA-201ENST00000230480 PUF60Q9UHX1 559 aaKnown RBP14.97□□□□□ -0.01
VEGFA-201ENST00000230480 CDH22Q9UJ99 828 aa14.97□□□□□ -0.01
VEGFA-201ENST00000230480 ADAM28Q9UKQ2 775 aa14.97□□□□□ -0.01
VEGFA-201ENST00000230480 BARX2Q9UMQ3 279 aaPredicted RBP14.97□□□□□ -0.01
VEGFA-201ENST00000230480 C2orf16Q68DN1 1984 aa14.96□□□□□ -0.01
VEGFA-201ENST00000230480 I3L4J1 428 aa14.96□□□□□ -0.01
VEGFA-201ENST00000230480 ADAM12O43184 909 aa14.96□□□□□ -0.01
VEGFA-201ENST00000230480 NFICP08651 508 aa14.96□□□□□ -0.01
VEGFA-201ENST00000230480 BRCC3P46736 316 aa14.96□□□□□ -0.01
VEGFA-201ENST00000230480 SKIV2LQ15477 1246 aaKnown RBP14.96□□□□□ -0.01
VEGFA-201ENST00000230480 TJAP1Q5JTD0 557 aa14.96□□□□□ -0.01
VEGFA-201ENST00000230480 LNX1Q8TBB1 728 aaPredicted RBP14.96□□□□□ -0.01
VEGFA-201ENST00000230480 SAAL1Q96ER3 474 aa14.96□□□□□ -0.01
VEGFA-201ENST00000230480 BICD1Q96G01 975 aa14.96□□□□□ -0.01
VEGFA-201ENST00000230480 NECAB3Q96P71 396 aaPredicted RBP14.96□□□□□ -0.01
VEGFA-201ENST00000230480 RPS6KC1Q96S38 1066 aa14.96□□□□□ -0.01
VEGFA-201ENST00000230480 NOTCH4Q99466 2003 aa14.96□□□□□ -0.01
VEGFA-201ENST00000230480 MSTO1Q9BUK6 570 aa14.96□□□□□ -0.01
VEGFA-201ENST00000230480 COLEC11Q9BWP8 271 aa14.96□□□□□ -0.01
VEGFA-201ENST00000230480 PLEKHA5Q9HAU0 1116 aa14.96□□□□□ -0.01
VEGFA-201ENST00000230480 USP25Q9UHP3 1055 aa14.96□□□□□ -0.01
VEGFA-201ENST00000230480 AGO2Q9UKV8 859 aaKnown RBP14.96□□□□□ -0.01
VEGFA-201ENST00000230480 PCDHB13Q9Y5F0 798 aa14.96□□□□□ -0.01
VEGFA-201ENST00000230480 MUC3AQ02505 3323 aa14.96□□□□□ -0.01
VEGFA-201ENST00000230480 GOLGA8IPA6NC78 632 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 GOLGA8JA6NMD2 632 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 EIF3DO15371 548 aaKnown RBP eCLIP14.95□□□□□ -0.02
VEGFA-201ENST00000230480 TEX28O15482 410 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 TBC1D4O60343 1298 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 IL9P15248 144 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 EPCAMP16422 314 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 FGFR3P22607 806 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 LRPAP1P30533 357 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 MRPS5P82675 430 aaKnown RBP14.95□□□□□ -0.02
VEGFA-201ENST00000230480 AMPD3Q01432 767 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 SMC1AQ14683 1233 aaKnown RBP14.95□□□□□ -0.02
VEGFA-201ENST00000230480 JADE1Q6IE81 842 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 LILRA6Q6PI73 481 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 DCLRE1AQ6PJP8 1040 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 TMEM87AQ8NBN3 555 aa14.95□□□□□ -0.02
VEGFA-201ENST00000230480 SPATA20Q8TB22 786 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms