RNA–Protein interactions for RNA: ENST00000228425.10

PPFIBP1-201, Transcript of PPFIA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIBP1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-201ENST00000228425 ITGA6P23229 1130 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 PTK2Q05397 1052 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 SCRN1Q12765 414 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 GATAD2AQ86YP4 633 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 NUP93Q8N1F7 819 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 C7orf31Q8N865 590 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 RAPGEF5Q92565 580 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 SARS2Q9NP81 518 aaKnown RBP6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 DDX28Q9NUL7 540 aaKnown RBP6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 TMEM161AQ9NX61 479 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 ADD3Q9UEY8 706 aaKnown RBP6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 NFU1Q9UMS0 254 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 ATP11BQ9Y2G3 1177 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 ZMYM6O95789 1325 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 LRRC10BA6NIK2 292 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 PQBP1O60828 265 aaKnown RBP6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 CCDC130P13994 396 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 CSE1LP55060 971 aaKnown RBP6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 TIGD7Q6NT04 549 aaPredicted RBP6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 PPP1R2P3Q6NXS1 205 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 LRRC31Q6UY01 552 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 C10orf53Q8N6V4 93 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 CEP70Q8NHQ1 597 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 CLIP3Q96DZ5 547 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 RADILQ96JH8 1075 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 PPP1R13BQ96KQ4 1090 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 TUBB6Q9BUF5 446 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 SPZ1Q9BXG8 430 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 PARVBQ9HBI1 364 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 ANGPTL2Q9UKU9 493 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 ZMYND8Q9ULU4 1186 aaPredicted RBP6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 COL5A3P25940 1745 aaPredicted RBP6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 A6NCN8 305 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 CYBBP04839 570 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 GNAT1P11488 350 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 DARSP14868 501 aaKnown RBP6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 SMARCA1P28370 1054 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 ZAP70P43403 619 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 MFAP3P55082 362 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 HPCAP84074 193 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 MOGSQ13724 837 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 DMC1Q14565 340 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 CCDC142Q17RM4 750 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 TTC38Q5R3I4 469 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 GPBP1Q86WP2 473 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 SCYL3Q8IZE3 742 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 ST13P4Q8IZP2 240 aaPredicted RBP6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 ARHGAP18Q8N392 663 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 HES6Q96HZ4 224 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 TSEN34Q9BSV6 310 aaKnown RBP6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 TRIM62Q9BVG3 475 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 VPS45Q9NRW7 570 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 NDFIP2Q9NV92 336 aa6.29□□□□□ -1.4
PPFIBP1-201ENST00000228425 SOS2Q07890 1332 aaPredicted RBP6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 PRRT4C9JH25 899 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 TMCC2O75069 709 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 A1BGP04217 495 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 C4BPBP20851 252 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 VARSP26640 1264 aaKnown RBP6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 ST13P50502 369 aaKnown RBP6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 PROSER3Q2NL68 480 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 TEDDM1Q5T9Z0 273 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 MAMSTRQ6ZN01 415 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 KCTD6Q8NC69 237 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 TPCN2Q8NHX9 752 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 SPATA16Q9BXB7 569 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 MRPL9Q9BYD2 267 aaKnown RBP6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 MAGEB5Q9BZ81 275 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 FHDC1Q9C0D6 1143 aaPredicted RBP6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 TMEM245Q9H330 911 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 RUBCNLQ9H714 662 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 EMC3Q9P0I2 261 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 STRIP2Q9ULQ0 834 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 MAPK8IP1Q9UQF2 711 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 DENND3A2RUS2 1198 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 TCP10L2B9ZVM9 353 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 INO80B-WBP1J3KQ70 363 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 TK2O00142 265 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 DYRK3O43781 588 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 DAB1O75553 588 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 ALDH1A1P00352 501 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 LIFRP42702 1097 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 PMS2P54278 862 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 OLR1P78380 273 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 USP39Q53GS9 565 aaKnown RBP6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 FSCBQ5H9T9 825 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 BZW1Q7L1Q6 419 aaKnown RBP6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 LUZP2Q86TE4 346 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 ARL8AQ96BM9 186 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 PSMB7Q99436 277 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 DDX50Q9BQ39 737 aaKnown RBP6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 KIAA1586Q9HCI6 787 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 FANCFQ9NPI8 374 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 ATP8A2Q9NTI2 1148 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 ABCC12Q96J65 1359 aa6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 TARSL2A2RTX5 802 aaKnown RBP6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 POLR2DO15514 142 aaKnown RBP6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 MAP4P27816 1152 aaKnown RBP6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 ATN1P54259 1190 aaPredicted RBP6.28□□□□□ -1.4
PPFIBP1-201ENST00000228425 ADKP55263 362 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms