RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 POP1Q99575 1024 aaKnown RBP12.24□□□□□ -0.45
CCND1-201ENST00000227507 DNAJC12Q9UKB3 198 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 INO80B-WBP1J3KQ70 363 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 NFKBIEO00221 500 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 ATMINO43313 823 aaPredicted RBP12.24□□□□□ -0.45
CCND1-201ENST00000227507 ICAM1P05362 532 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 NR3C2P08235 984 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 FERP16591 822 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 TNNI1P19237 187 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 MMP13P45452 471 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 CASP4P49662 377 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 RASSF2P50749 326 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 IL9RQ01113 521 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 ZNF268Q14587 947 aaPredicted RBP12.24□□□□□ -0.45
CCND1-201ENST00000227507 PPP2R5EQ16537 467 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 ARHGEF18Q6ZSZ5 1173 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 DPH6Q7L8W6 267 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 SFR1Q86XK3 245 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 TRIM59Q8IWR1 403 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 CEP63Q96MT8 703 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 INO80BQ9C086 356 aaPredicted RBP12.24□□□□□ -0.45
CCND1-201ENST00000227507 THAP2Q9H0W7 228 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 CORO1CQ9ULV4 474 aaPredicted RBP12.24□□□□□ -0.45
CCND1-201ENST00000227507 SLC12A4Q9UP95 1085 aa12.24□□□□□ -0.45
CCND1-201ENST00000227507 HNRNPDLO14979 420 aaKnown RBP12.23□□□□□ -0.45
CCND1-201ENST00000227507 ENTPD5O75356 428 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 SMNDC1O75940 238 aaKnown RBP eCLIP12.23□□□□□ -0.45
CCND1-201ENST00000227507 MARK3P27448 753 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 GCLCP48506 637 aaPredicted RBP12.23□□□□□ -0.45
CCND1-201ENST00000227507 DBN1Q16643 649 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 RMDN2Q96LZ7 410 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 ALG6Q9Y672 507 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 DDX3XO00571 662 aaKnown RBP eCLIP12.23□□□□□ -0.45
CCND1-201ENST00000227507 TRIM49P0CI25 452 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 TRIM49CP0CI26 452 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 DLATP10515 647 aaKnown RBP12.23□□□□□ -0.45
CCND1-201ENST00000227507 PON1P27169 355 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 ZNF365Q70YC5 407 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 RAET1EQ8TD07 263 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 RFFLQ8WZ73 363 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 KMT5AQ9NQR1 393 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 IL17RBQ9NRM6 502 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.23□□□□□ -0.45
CCND1-201ENST00000227507 AIPL1Q9NZN9 384 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 C2CD2Q9Y426 696 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 COL18A1P39060 1754 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 SPDYE5A6NIY4 337 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 PPFIA2O75334 1257 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 SGO2Q562F6 1265 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 EXOC3L1Q86VI1 746 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 PIGOQ8TEQ8 1089 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 PARVGQ9HBI0 331 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 ALG13Q9NP73 1137 aaKnown RBP12.23□□□□□ -0.45
CCND1-201ENST00000227507 ZMYND8Q9ULU4 1186 aaPredicted RBP12.23□□□□□ -0.45
CCND1-201ENST00000227507 CBX6O95503 412 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 EPHB2P29323 1055 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 EMC10Q5UCC4 262 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 PIGWQ7Z7B1 504 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 RNF169Q8NCN4 708 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 ATXN2LQ8WWM7 1075 aaKnown RBP12.23□□□□□ -0.45
CCND1-201ENST00000227507 PGM2Q96G03 612 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 DYDC2Q96IM9 177 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 CYTH2Q99418 400 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 HEMGNQ9BXL5 484 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 VPS37BQ9H9H4 285 aa12.23□□□□□ -0.45
CCND1-201ENST00000227507 ZNF541Q9H0D2 1346 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 COQ9O75208 318 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 P4HBP07237 508 aaKnown RBP12.22□□□□□ -0.45
CCND1-201ENST00000227507 PAEPP09466 180 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 UBTFL6P0CB48 400 aaPredicted RBP12.22□□□□□ -0.45
CCND1-201ENST00000227507 CA4P22748 312 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 PTENP60484 403 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 PLCB3Q01970 1234 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 AUHQ13825 339 aaKnown RBP12.22□□□□□ -0.45
CCND1-201ENST00000227507 RNF220Q5VTB9 566 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 TLCD1Q96CP7 247 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 BTBD6Q96KE9 485 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 FGD4Q96M96 766 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 COL22A1Q8NFW1 1626 aaPredicted RBP12.22□□□□□ -0.45
CCND1-201ENST00000227507 MYH6P13533 1939 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 FAM187AA6NFU0 413 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 FTLP02792 175 aaPredicted RBP12.22□□□□□ -0.45
CCND1-201ENST00000227507 ZCCHC18P0CG32 403 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 QARSP47897 775 aaKnown RBP12.22□□□□□ -0.45
CCND1-201ENST00000227507 MARCKSL1P49006 195 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 PPATQ06203 517 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 RIPK1Q13546 671 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 BLMHQ13867 455 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 EPM2AIP1Q7L775 607 aaPredicted RBP12.22□□□□□ -0.45
CCND1-201ENST00000227507 IRF2BP2Q7Z5L9 587 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 SCFD1Q8WVM8 642 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 PWWP2AQ96N64 755 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 NKX1-2Q9UD57 310 aaPredicted RBP12.22□□□□□ -0.45
CCND1-201ENST00000227507 A0A0G2JND7 137 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 MAPK13O15264 365 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 TXNP10599 105 aaKnown RBP12.22□□□□□ -0.45
CCND1-201ENST00000227507 SERPINB4P48594 390 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 RPS6P62753 249 aaKnown RBP12.22□□□□□ -0.45
CCND1-201ENST00000227507 Q3C1V9 767 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 CDCA2Q69YH5 1023 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms