RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 A0A1B0GVG6 124 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 MAGEA13PA6NCF6 341 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 CYP26A1O43174 497 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 RNF8O76064 485 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 BFSP1Q12934 665 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 NR1H3Q13133 447 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 USH1GQ495M9 461 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 LRRC74BQ6ZQY2 392 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 C4orf50Q6ZRC1 276 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 BBOF1Q8ND07 529 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 ATL2Q8NHH9 583 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 SLC5A5Q92911 643 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 EPAS1Q99814 870 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 MKNK1Q9BUB5 465 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 GPR88Q9GZN0 384 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 GLT8D2Q9H1C3 349 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 GPR75-ASB3A0A0A6YYF3 556 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 EDF1O60869 148 aaKnown RBP15.11■□□□□ 0.01
SHPK-201ENST00000225519 SPATA31C1P0DKV0 1188 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 T-ENOLP0DO92 83 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 EEF2P13639 858 aaKnown RBP15.11■□□□□ 0.01
SHPK-201ENST00000225519 BMT2Q1RMZ1 405 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 CCNJLQ8IV13 435 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 ARHGEF19Q8IW93 802 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 CCDC89Q8N998 374 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 ZFAND2BQ8WV99 257 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 C7orf43Q8WVR3 580 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 RPGRQ92834 1020 aaKnown RBP15.11■□□□□ 0.01
SHPK-201ENST00000225519 LGALS13Q9UHV8 139 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 G3BP2Q9UN86 482 aaKnown RBP15.11■□□□□ 0.01
SHPK-201ENST00000225519 ASB3Q9Y575 518 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 ASMTLO95671 621 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 RPA3P35244 121 aaPredicted RBP15.11■□□□□ 0.01
SHPK-201ENST00000225519 ITPK1Q13572 414 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 PKN2Q16513 984 aaKnown RBP15.11■□□□□ 0.01
SHPK-201ENST00000225519 RINT1Q6NUQ1 792 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 LVRNQ6Q4G3 990 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 SMIM5Q71RC9 77 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 DDX50Q9BQ39 737 aaKnown RBP15.11■□□□□ 0.01
SHPK-201ENST00000225519 SYT11Q9BT88 431 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 AGPAT3Q9NRZ7 376 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 ACTL7BQ9Y614 415 aa15.11■□□□□ 0.01
SHPK-201ENST00000225519 ZWINTO95229 277 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 BAG2O95816 211 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 PYGLP06737 847 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 ESRRAP11474 423 aaPredicted RBP15.1■□□□□ 0.01
SHPK-201ENST00000225519 HADHBP55084 474 aaKnown RBP15.1■□□□□ 0.01
SHPK-201ENST00000225519 SLC34A1Q06495 639 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 QRICH1Q2TAL8 776 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 SEPT12Q8IYM1 358 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 OLIG1Q8TAK6 271 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 KAT5Q92993 513 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 TRAPPC9Q96Q05 1148 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 EIF2AK1Q9BQI3 630 aaKnown RBP15.1■□□□□ 0.01
SHPK-201ENST00000225519 VCX3BQ9H321 246 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 VCX3AQ9NNX9 186 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 ALG13Q9NP73 1137 aaKnown RBP15.1■□□□□ 0.01
SHPK-201ENST00000225519 SNED1Q8TER0 1413 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 POTEJP0CG39 1038 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 RRM1P23921 792 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 CLK2P49760 499 aaKnown RBP15.1■□□□□ 0.01
SHPK-201ENST00000225519 PTK6Q13882 451 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 GPATCH4Q5T3I0 446 aaKnown RBP15.1■□□□□ 0.01
SHPK-201ENST00000225519 SYDE1Q6ZW31 735 aaPredicted RBP15.1■□□□□ 0.01
SHPK-201ENST00000225519 SETDB2Q96T68 719 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 PCDHB18PQ96TA0 734 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 SMG5Q9UPR3 1016 aaKnown RBP15.1■□□□□ 0.01
SHPK-201ENST00000225519 TAF1P21675 1872 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 SNAP25P60880 206 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 SIX1Q15475 284 aaPredicted RBP15.1■□□□□ 0.01
SHPK-201ENST00000225519 PDK4Q16654 411 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 TRABD2AQ86V40 505 aa15.1■□□□□ 0.01
SHPK-201ENST00000225519 ZNF526Q8TF50 670 aaPredicted RBP15.1■□□□□ 0.01
SHPK-201ENST00000225519 RTFDC1Q9BY42 306 aaPredicted RBP15.1■□□□□ 0.01
SHPK-201ENST00000225519 CREB3O43889 395 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 RFX1P22670 979 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 SLC45A4Q5BKX6 768 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 C6orf163Q5TEZ5 329 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 SLC30A10Q6XR72 485 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 OTOAQ7RTW8 1153 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 C12orf50Q8NA57 414 aaPredicted RBP15.09■□□□□ 0.01
SHPK-201ENST00000225519 DYDC2Q96IM9 177 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 LRRC4BQ9NT99 713 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 HEY2Q9UBP5 337 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 LAMB1P07942 1786 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 FRMPD4Q14CM0 1322 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 FSCN2O14926 492 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 SLC26A4O43511 780 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 MOGSQ13724 837 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 SLC5A9Q2M3M2 681 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 RHBDF2Q6PJF5 856 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 RIBC1Q8N443 379 aaPredicted RBP15.09■□□□□ 0.01
SHPK-201ENST00000225519 C10orf82Q8WW14 230 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 CADM1Q9BY67 442 aaKnown RBP15.09■□□□□ 0.01
SHPK-201ENST00000225519 OLFML3Q9NRN5 406 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 LARSQ9P2J5 1176 aaKnown RBP15.09■□□□□ 0.01
SHPK-201ENST00000225519 USTQ9Y2C2 406 aa15.09■□□□□ 0.01
SHPK-201ENST00000225519 EIF3DO15371 548 aaKnown RBP eCLIP15.09■□□□□ 0.01
SHPK-201ENST00000225519 HNRNPCL1O60812 293 aaKnown RBP15.09■□□□□ 0.01
SHPK-201ENST00000225519 TJP3O95049 919 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms