RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 EMC2Q15006 297 aa23.78■■□□□ 1.4
CCDC9-201ENST00000221922 KRT71Q3SY84 523 aa23.78■■□□□ 1.4
CCDC9-201ENST00000221922 MTERF2Q49AM1 385 aa23.78■■□□□ 1.4
CCDC9-201ENST00000221922 ODF2Q5BJF6 829 aa23.78■■□□□ 1.4
CCDC9-201ENST00000221922 SEPT14Q6ZU15 432 aa23.78■■□□□ 1.4
CCDC9-201ENST00000221922 SV2AQ7L0J3 742 aa23.78■■□□□ 1.4
CCDC9-201ENST00000221922 SLC47A2Q86VL8 602 aa23.78■■□□□ 1.4
CCDC9-201ENST00000221922 ZNF526Q8TF50 670 aaPredicted RBP23.78■■□□□ 1.4
CCDC9-201ENST00000221922 POP1Q99575 1024 aaKnown RBP23.78■■□□□ 1.4
CCDC9-201ENST00000221922 TRIM31Q9BZY9 425 aa23.78■■□□□ 1.4
CCDC9-201ENST00000221922 SIP14410 1827 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 SOWAHBA6NEL2 793 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 SORBS3O60504 671 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 PEX10O60683 326 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 NUDT17P0C025 328 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 FMO1Q01740 532 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 JAMLQ86YT9 394 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 ANKRD13AQ8IZ07 590 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 GLG1Q92896 1179 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 OTUD5Q96G74 571 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 EPB41L4BQ9H329 900 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 ATP8A1Q9Y2Q0 1164 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 SPDYE5A6NIY4 337 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 TULP1O00294 542 aaPredicted RBP23.77■■□□□ 1.4
CCDC9-201ENST00000221922 UBA1P22314 1058 aaKnown RBP23.77■■□□□ 1.4
CCDC9-201ENST00000221922 TMOD1P28289 359 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 POLGP54098 1239 aaPredicted RBP23.77■■□□□ 1.4
CCDC9-201ENST00000221922 MAGOHP61326 146 aaKnown RBP23.77■■□□□ 1.4
CCDC9-201ENST00000221922 GCNT1Q02742 428 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.77■■□□□ 1.4
CCDC9-201ENST00000221922 TAS1R3Q7RTX0 852 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 NCAPG2Q86XI2 1143 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 MAGOHBQ96A72 148 aaKnown RBP23.77■■□□□ 1.4
CCDC9-201ENST00000221922 WNT8AQ9H1J5 351 aa23.77■■□□□ 1.4
CCDC9-201ENST00000221922 TOPORSQ9NS56 1045 aaPredicted RBP23.77■■□□□ 1.4
CCDC9-201ENST00000221922 DCDC2CA8MYV0 355 aa23.76■■□□□ 1.39
CCDC9-201ENST00000221922 EXTL3O43909 919 aa23.76■■□□□ 1.39
CCDC9-201ENST00000221922 PHF2O75151 1096 aa23.76■■□□□ 1.39
CCDC9-201ENST00000221922 DLATP10515 647 aaKnown RBP23.76■■□□□ 1.39
CCDC9-201ENST00000221922 COPB2P35606 906 aa23.76■■□□□ 1.39
CCDC9-201ENST00000221922 PTGIRP43119 386 aa23.76■■□□□ 1.39
CCDC9-201ENST00000221922 LIG4P49917 911 aa23.76■■□□□ 1.39
CCDC9-201ENST00000221922 ADAT2Q7Z6V5 191 aaKnown RBP23.76■■□□□ 1.39
CCDC9-201ENST00000221922 ZSWIM1Q9BR11 485 aa23.76■■□□□ 1.39
CCDC9-201ENST00000221922 NIFKQ9BYG3 293 aaKnown RBP23.76■■□□□ 1.39
CCDC9-201ENST00000221922 ASCC2Q9H1I8 757 aaPredicted RBP23.76■■□□□ 1.39
CCDC9-201ENST00000221922 DHX33Q9H6R0 707 aaKnown RBP23.76■■□□□ 1.39
CCDC9-201ENST00000221922 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.76■■□□□ 1.391e-6■■■■■ 98.8
CCDC9-201ENST00000221922 UVRAGQ9P2Y5 699 aa23.76■■□□□ 1.39
CCDC9-201ENST00000221922 GTF3C4Q9UKN8 822 aa23.76■■□□□ 1.39
CCDC9-201ENST00000221922 KCNH4Q9UQ05 1017 aa23.76■■□□□ 1.39
CCDC9-201ENST00000221922 CYP1A2P05177 515 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 MMEP08473 750 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 CHRNA3P32297 505 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 NF2P35240 595 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 STRN3Q13033 797 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 ZDHHC24Q6UX98 284 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 FAM213AQ9BRX8 229 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 PABPC3Q9H361 631 aaKnown RBP23.75■■□□□ 1.39
CCDC9-201ENST00000221922 CNOT10Q9H9A5 744 aaKnown RBP23.75■■□□□ 1.39
CCDC9-201ENST00000221922 LRRC4CQ9HCJ2 640 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 PCYOX1Q9UHG3 505 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 RASAL2Q9UJF2 1139 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 CAPN7Q9Y6W3 813 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 C5orf60A6NFR6 353 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 CNMDO75829 334 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 FARP2O94887 1054 aaPredicted RBP23.75■■□□□ 1.39
CCDC9-201ENST00000221922 GGPS1O95749 300 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 TGFB3P10600 412 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 CTNNA2P26232 953 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 IFFO1Q0D2I5 559 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 FBXW10Q5XX13 1052 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 RAPGEF5Q92565 580 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 PORCNQ9H237 461 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 AGTPBP1Q9UPW5 1226 aa23.75■■□□□ 1.39
CCDC9-201ENST00000221922 SLC25A27O95847 323 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 PEX5P50542 639 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 DRP2Q13474 957 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 NEDD9Q14511 834 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 HOOK3Q86VS8 718 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 PRELID2Q8N945 189 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 ZNF564Q8TBZ8 553 aaPredicted RBP23.74■■□□□ 1.39
CCDC9-201ENST00000221922 KRT35Q92764 455 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 CDCA5Q96FF9 252 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 CLMNQ96JQ2 1002 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 C1orf112Q9NSG2 853 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 DDX20Q9UHI6 824 aaKnown RBP23.74■■□□□ 1.39
CCDC9-201ENST00000221922 HNRNPH1P31943 449 aaKnown RBP23.74■■□□□ 1.39
CCDC9-201ENST00000221922 GBP1P32455 592 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 PMS2P54278 862 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 CLDN10P78369 228 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 PPIL2Q13356 520 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 PSMD6Q15008 389 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 C15orf39Q6ZRI6 1047 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 ARMC9Q7Z3E5 817 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 CENPTQ96BT3 561 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 ZNF653Q96CK0 615 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 CEP89Q96ST8 783 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 NUP85Q9BW27 656 aa23.74■■□□□ 1.39
CCDC9-201ENST00000221922 STYXL1Q9Y6J8 313 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms