RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CCDC38Q502W7 563 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 CHADLQ6NUI6 762 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 SV2AQ7L0J3 742 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 MCOLN2Q8IZK6 566 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 RDM1Q8NG50 284 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 DYDC1Q8WWB3 177 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 TRAIPQ9BWF2 469 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 KMT5AQ9NQR1 393 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 TPX2Q9ULW0 747 aaKnown RBP14.2□□□□□ -0.14
SRP54-201ENST00000216774 ZNFX1Q9P2E3 1918 aaKnown RBP14.2□□□□□ -0.14
SRP54-201ENST00000216774 TMEM120BA0PK00 339 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 PLSCR1O15162 318 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 WDR46O15213 610 aaKnown RBP14.2□□□□□ -0.14
SRP54-201ENST00000216774 SORBS3O60504 671 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 KRT5P13647 590 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 ATF2P15336 505 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 ELF3P78545 371 aaPredicted RBP14.2□□□□□ -0.14
SRP54-201ENST00000216774 PGM5Q15124 567 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 PLA2G4FQ68DD2 849 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 FAM83AQ86UY5 434 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 PLCD3Q8N3E9 789 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 OGFOD1Q8N543 542 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 ATL2Q8NHH9 583 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 DHX38Q92620 1227 aaKnown RBP14.2□□□□□ -0.14
SRP54-201ENST00000216774 GMLQ99445 158 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 DCLK3Q9C098 648 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 QTRT2Q9H974 415 aaKnown RBP14.2□□□□□ -0.14
SRP54-201ENST00000216774 TOPORSQ9NS56 1045 aaPredicted RBP14.2□□□□□ -0.14
SRP54-201ENST00000216774 CHST7Q9NS84 486 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 USP15Q9Y4E8 981 aaPredicted RBP14.2□□□□□ -0.14
SRP54-201ENST00000216774 PCDHB2Q9Y5E7 798 aa14.2□□□□□ -0.14
SRP54-201ENST00000216774 MROH7Q68CQ1 1323 aa14.19□□□□□ -0.14
SRP54-201ENST00000216774 CCNE2O96020 404 aa14.19□□□□□ -0.14
SRP54-201ENST00000216774 BPIFB4P59827 614 aa14.19□□□□□ -0.14
SRP54-201ENST00000216774 IRX3P78415 501 aaPredicted RBP14.19□□□□□ -0.14
SRP54-201ENST00000216774 MAP3K10Q02779 954 aa14.19□□□□□ -0.14
SRP54-201ENST00000216774 SNX1Q13596 522 aa14.19□□□□□ -0.14
SRP54-201ENST00000216774 SLC39A4Q6P5W5 647 aa14.19□□□□□ -0.14
SRP54-201ENST00000216774 FAM228AQ86W67 206 aa14.19□□□□□ -0.14
SRP54-201ENST00000216774 GBP7Q8N8V2 638 aaPredicted RBP14.19□□□□□ -0.14
SRP54-201ENST00000216774 BBOF1Q8ND07 529 aa14.19□□□□□ -0.14
SRP54-201ENST00000216774 POMGNT1Q8WZA1 660 aa14.19□□□□□ -0.14
SRP54-201ENST00000216774 LPAR1Q92633 364 aa14.19□□□□□ -0.14
SRP54-201ENST00000216774 DDX27Q96GQ7 796 aaKnown RBP14.19□□□□□ -0.14
SRP54-201ENST00000216774 PLCD4Q9BRC7 762 aa14.19□□□□□ -0.14
SRP54-201ENST00000216774 TMEM39BQ9GZU3 492 aa14.19□□□□□ -0.14
SRP54-201ENST00000216774 C1orf112Q9NSG2 853 aa14.19□□□□□ -0.14
SRP54-201ENST00000216774 BRWD3Q6RI45 1802 aa14.19□□□□□ -0.14
SRP54-201ENST00000216774 GARTP22102 1010 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 CHRNA5P30532 468 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 CHKAP35790 457 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 ITGA8P53708 1063 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 NEDD9Q14511 834 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 TBC1D10BQ4KMP7 808 aaPredicted RBP14.18□□□□□ -0.14
SRP54-201ENST00000216774 BRDTQ58F21 947 aaPredicted RBP14.18□□□□□ -0.14
SRP54-201ENST00000216774 VSTM1Q6UX27 236 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 ANO5Q75V66 913 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 RELL1Q8IUW5 271 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 GPD1LQ8N335 351 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 CCDC63Q8NA47 563 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 KIFC3Q9BVG8 833 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 ZNF341Q9BYN7 854 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 SLC38A10Q9HBR0 1119 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 LGALS13Q9UHV8 139 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 ANAPC5Q9UJX4 755 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 MYPNQ86TC9 1320 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 THAP12O43422 761 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 PSTPIP1O43586 416 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 SUN1O94901 812 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 EIF2AK2P19525 551 aaKnown RBP14.18□□□□□ -0.14
SRP54-201ENST00000216774 MKRN3Q13064 507 aaKnown RBP14.18□□□□□ -0.14
SRP54-201ENST00000216774 RIPK1Q13546 671 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 C15orf39Q6ZRI6 1047 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 OTUD6AQ7L8S5 288 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 ATG4AQ8WYN0 398 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 TAAR1Q96RJ0 339 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 SENP7Q9BQF6 1050 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 VEZTQ9HBM0 779 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 NEU2Q9Y3R4 380 aa14.18□□□□□ -0.14
SRP54-201ENST00000216774 TCP11X1B4DZS4 312 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 O00370 1275 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 ATP9AO75110 1047 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 PROSCO94903 275 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 RRM1P23921 792 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 ABCD1P33897 745 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 ADCY8P40145 1251 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 NSFP46459 744 aaKnown RBP14.17□□□□□ -0.14
SRP54-201ENST00000216774 RTP1P59025 263 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 RPS6P62753 249 aaKnown RBP14.17□□□□□ -0.14
SRP54-201ENST00000216774 CLDN10P78369 228 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 KLF1Q13351 362 aaPredicted RBP14.17□□□□□ -0.14
SRP54-201ENST00000216774 CCNG2Q16589 344 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 HIBCHQ6NVY1 386 aaPredicted RBP14.17□□□□□ -0.14
SRP54-201ENST00000216774 XRRA1Q6P2D8 792 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 CEP128Q6ZU80 1094 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 CDAN1Q8IWY9 1227 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 CCDC89Q8N998 374 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 CKAP2Q8WWK9 683 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 SCLT1Q96NL6 688 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 MOV10L1Q9BXT6 1211 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms