RNA–Protein interactions for RNA: ENST00000216288.11

MARK3-201, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-201ENST00000216288 SGSM3Q96HU1 749 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 WNT8AQ9H1J5 351 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 CNOT10Q9H9A5 744 aaKnown RBP13.06□□□□□ -0.32
MARK3-201ENST00000216288 CTDP1Q9Y5B0 961 aaPredicted RBP13.06□□□□□ -0.32
MARK3-201ENST00000216288 UBR3Q6ZT12 1888 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 C5orf60A6NFR6 353 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 ZNF862O60290 1169 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 RARGP13631 454 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 ELF3P78545 371 aaPredicted RBP13.06□□□□□ -0.32
MARK3-201ENST00000216288 DMP1Q13316 513 aaPredicted RBP13.06□□□□□ -0.32
MARK3-201ENST00000216288 TMED2Q15363 201 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 MTERF2Q49AM1 385 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 TMEM270Q6UE05 265 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 TRPM8Q7Z2W7 1104 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 SLC9A9Q8IVB4 645 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 CCDC63Q8NA47 563 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 PSPC1Q8WXF1 523 aaKnown RBP13.06□□□□□ -0.32
MARK3-201ENST00000216288 RIT2Q99578 217 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 PAGR1Q9BTK6 254 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 EHMT1Q9H9B1 1298 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 SEPT9Q9UHD8 586 aaPredicted RBP13.06□□□□□ -0.32
MARK3-201ENST00000216288 STK24Q9Y6E0 443 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 PTPRJQ12913 1337 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 CHUKO15111 745 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 IFNB1P01574 187 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 PAEPP09466 180 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 DSG3P32926 999 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 RNASELQ05823 741 aaKnown RBP13.06□□□□□ -0.32
MARK3-201ENST00000216288 BAATQ14032 418 aaPredicted RBP13.06□□□□□ -0.32
MARK3-201ENST00000216288 ARHGEF16Q5VV41 709 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 VSTM1Q6UX27 236 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 DDX1Q92499 740 aaKnown RBP13.06□□□□□ -0.32
MARK3-201ENST00000216288 STAMBPL1Q96FJ0 436 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 RMDN2Q96LZ7 410 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 FHDC1Q9C0D6 1143 aaPredicted RBP13.06□□□□□ -0.32
MARK3-201ENST00000216288 ANAPC5Q9UJX4 755 aa13.06□□□□□ -0.32
MARK3-201ENST00000216288 BRCA2P51587 3418 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 MROH7Q68CQ1 1323 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 SLC26A4O43511 780 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 RPL7AP62424 266 aaKnown RBP13.05□□□□□ -0.32
MARK3-201ENST00000216288 DYNLT1P63172 113 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 GTF2BQ00403 316 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 MTMR2Q13614 643 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 PRKG1Q13976 671 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 CCDC91Q7Z6B0 441 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 C4orf33Q8N1A6 199 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 TAOK3Q9H2K8 898 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 HERC5Q9UII4 1024 aaKnown RBP13.05□□□□□ -0.32
MARK3-201ENST00000216288 GTF3C4Q9UKN8 822 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 CNTNAP1P78357 1384 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 NRLP54845 237 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 NLRP11P59045 1033 aaKnown RBP13.05□□□□□ -0.32
MARK3-201ENST00000216288 TXNRD3NBQ6F5E7 133 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 ACAD10Q6JQN1 1059 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 SLC17A8Q8NDX2 589 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 N4BP2L2Q92802 583 aaPredicted RBP13.05□□□□□ -0.32
MARK3-201ENST00000216288 RPS6KC1Q96S38 1066 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 DIS3Q9Y2L1 958 aaKnown RBP13.05□□□□□ -0.32
MARK3-201ENST00000216288 SLX4Q8IY92 1834 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 ANKRD31Q8N7Z5 1873 aa13.05□□□□□ -0.32
MARK3-201ENST00000216288 WDR91A4D1P6 747 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 UPP2O95045 317 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 AGTP01019 485 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 ATF2P15336 505 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 GAD2Q05329 585 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 PGM5Q15124 567 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 CDR2LQ86X02 465 aaPredicted RBP13.04□□□□□ -0.32
MARK3-201ENST00000216288 NCAPGQ9BPX3 1015 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 NOD2Q9HC29 1040 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 ALG13Q9NP73 1137 aaKnown RBP13.04□□□□□ -0.32
MARK3-201ENST00000216288 SLCO1B3Q9NPD5 702 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 NINJ2Q9NZG7 142 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 GREB1LQ9C091 1923 aaPredicted RBP13.04□□□□□ -0.32
MARK3-201ENST00000216288 CYP1A2P05177 515 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 ICAM1P05362 532 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 PLCB3Q01970 1234 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 MYO1EQ12965 1108 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 ORC1Q13415 861 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 NFIL3Q16649 462 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 KCNV2Q8TDN2 545 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 FAM151AQ8WW52 585 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 ATG4CQ96DT6 458 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 KLF6Q99612 283 aaPredicted RBP13.04□□□□□ -0.32
MARK3-201ENST00000216288 ACTR5Q9H9F9 607 aaPredicted RBP13.04□□□□□ -0.32
MARK3-201ENST00000216288 ATAD5Q96QE3 1844 aa13.04□□□□□ -0.32
MARK3-201ENST00000216288 LTBP4Q8N2S1 1624 aa13.03□□□□□ -0.32
MARK3-201ENST00000216288 IGF2BP3O00425 579 aaKnown RBP eCLIP13.03□□□□□ -0.32
MARK3-201ENST00000216288 SNX3O60493 162 aa13.03□□□□□ -0.32
MARK3-201ENST00000216288 SKAP2O75563 359 aaPredicted RBP13.03□□□□□ -0.32
MARK3-201ENST00000216288 STX2P32856 288 aa13.03□□□□□ -0.32
MARK3-201ENST00000216288 NSFP46459 744 aaKnown RBP13.03□□□□□ -0.32
MARK3-201ENST00000216288 SLMAPQ14BN4 828 aa13.03□□□□□ -0.32
MARK3-201ENST00000216288 P3H1Q32P28 736 aa13.03□□□□□ -0.32
MARK3-201ENST00000216288 ZNF365Q70YC5 407 aa13.03□□□□□ -0.32
MARK3-201ENST00000216288 PIGWQ7Z7B1 504 aa13.03□□□□□ -0.32
MARK3-201ENST00000216288 MCOLN2Q8IZK6 566 aa13.03□□□□□ -0.32
MARK3-201ENST00000216288 GIMAP7Q8NHV1 300 aa13.03□□□□□ -0.32
MARK3-201ENST00000216288 ZNF526Q8TF50 670 aaPredicted RBP13.03□□□□□ -0.32
MARK3-201ENST00000216288 TGS1Q96RS0 853 aaKnown RBP13.03□□□□□ -0.32
MARK3-201ENST00000216288 ECT2Q9H8V3 914 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms