RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 TTC26A0AVF1 554 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 EXOC3O60645 756 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 AKAP3O75969 853 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 IPO7O95373 1038 aaKnown RBP13.28□□□□□ -0.28
SNU13-201ENST00000215956 GHRP10912 638 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 CYLC1P35663 651 aaPredicted RBP13.28□□□□□ -0.28
SNU13-201ENST00000215956 NAMPTP43490 491 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 NPTX2P47972 431 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 ENPEPQ07075 957 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 CETN1Q12798 172 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 KCNH2Q12809 1159 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 BTG3Q14201 252 aaPredicted RBP13.28□□□□□ -0.28
SNU13-201ENST00000215956 INTS8Q75QN2 995 aaKnown RBP13.28□□□□□ -0.28
SNU13-201ENST00000215956 CACNA2D4Q7Z3S7 1137 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 TRIM50Q86XT4 487 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 MAP4K3Q8IVH8 894 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 TXLNBQ8N3L3 684 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 SMRP1Q8NCR6 262 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 LMBR1Q8WVP7 490 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 PPP2R3CQ969Q6 453 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 PLVAPQ9BX97 442 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 TTYH3Q9C0H2 523 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 POLR3FQ9H1D9 316 aaPredicted RBP13.28□□□□□ -0.28
SNU13-201ENST00000215956 DHX33Q9H6R0 707 aaKnown RBP13.28□□□□□ -0.28
SNU13-201ENST00000215956 BCAS3Q9H6U6 928 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 ALG13Q9NP73 1137 aaKnown RBP13.28□□□□□ -0.28
SNU13-201ENST00000215956 ZNF215Q9UL58 517 aaPredicted RBP13.28□□□□□ -0.28
SNU13-201ENST00000215956 TBX20Q9UMR3 447 aa13.28□□□□□ -0.28
SNU13-201ENST00000215956 PLXNA4Q9HCM2 1894 aa13.27□□□□□ -0.28
SNU13-201ENST00000215956 LOC730098B7Z3J9 87 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 CLIC2O15247 247 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 SLC16A4O15374 487 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 HBP1O60381 514 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 CHRNA1P02708 482 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 TNNT1P13805 278 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 TERF1P54274 439 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 ADAM17P78536 824 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 ZXDAP98168 799 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 STRN3Q13033 797 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 CAMK1Q14012 370 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 PTPN21Q16825 1174 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 GLIPR1L2Q4G1C9 344 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 E4F1Q66K89 784 aaPredicted RBP13.27□□□□□ -0.29
SNU13-201ENST00000215956 CCDC170Q8IYT3 715 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 FBXL6Q8N531 539 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 XXYLT1Q8NBI6 393 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 TMEM161BQ8NDZ6 487 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 ATP8B4Q8TF62 1192 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 ZNF689Q96CS4 500 aaPredicted RBP13.27□□□□□ -0.29
SNU13-201ENST00000215956 PRIMPOLQ96LW4 560 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 CEP72Q9P209 647 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 PLAGL2Q9UPG8 496 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 PAXBP1Q9Y5B6 917 aa13.27□□□□□ -0.29
SNU13-201ENST00000215956 DENND3A2RUS2 1198 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 P4HA2O15460 535 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 GFRA3O60609 400 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 KRT83P78385 493 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 TARBP2Q15633 366 aaKnown RBP13.26□□□□□ -0.29
SNU13-201ENST00000215956 MEA1Q16626 185 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 DCAF17Q5H9S7 520 aaPredicted RBP13.26□□□□□ -0.29
SNU13-201ENST00000215956 TCERG1LQ5VWI1 586 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 IER5Q5VY09 327 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 GBP6Q6ZN66 633 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 TRMT1LQ7Z2T5 733 aaKnown RBP13.26□□□□□ -0.29
SNU13-201ENST00000215956 C17orf53Q8N3J3 647 aaPredicted RBP13.26□□□□□ -0.29
SNU13-201ENST00000215956 DEPTORQ8TB45 409 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 SYN2Q92777 582 aaPredicted RBP13.26□□□□□ -0.29
SNU13-201ENST00000215956 PPP1R13BQ96KQ4 1090 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 PCYT2Q99447 389 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 KIAA1586Q9HCI6 787 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 POLD4Q9HCU8 107 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 PLCB1Q9NQ66 1216 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 GPRC5CQ9NQ84 441 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 CLEC1BQ9P126 229 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 MYO6Q9UM54 1294 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 PLXNA3P51805 1871 aa13.26□□□□□ -0.29
SNU13-201ENST00000215956 RIF1Q5UIP0 2472 aaKnown RBP13.25□□□□□ -0.29
SNU13-201ENST00000215956 TMEM150BA6NC51 233 aa13.25□□□□□ -0.29
SNU13-201ENST00000215956 MAFO75444 373 aaPredicted RBP13.25□□□□□ -0.29
SNU13-201ENST00000215956 GARTP22102 1010 aa13.25□□□□□ -0.29
SNU13-201ENST00000215956 DNAJB1P25685 340 aa13.25□□□□□ -0.29
SNU13-201ENST00000215956 HNRNPH3P31942 346 aaKnown RBP13.25□□□□□ -0.29
SNU13-201ENST00000215956 CYP2J2P51589 502 aa13.25□□□□□ -0.29
SNU13-201ENST00000215956 GOLGA8FQ08AF8 430 aa13.25□□□□□ -0.29
SNU13-201ENST00000215956 MGAT3Q09327 533 aa13.25□□□□□ -0.29
SNU13-201ENST00000215956 KCNA1Q09470 495 aa13.25□□□□□ -0.29
SNU13-201ENST00000215956 GOLGA8DPQ0D2H9 430 aa13.25□□□□□ -0.29
SNU13-201ENST00000215956 MXD4Q14582 209 aaPredicted RBP13.25□□□□□ -0.29
SNU13-201ENST00000215956 LPIN1Q14693 890 aa13.25□□□□□ -0.29
SNU13-201ENST00000215956 CBX2Q14781 532 aaPredicted RBP13.25□□□□□ -0.29
SNU13-201ENST00000215956 EXOC3L4Q17RC7 722 aa13.25□□□□□ -0.29
SNU13-201ENST00000215956 SLFN12LQ6IEE8 588 aa13.25□□□□□ -0.29
SNU13-201ENST00000215956 ADGRD2Q7Z7M1 963 aa13.25□□□□□ -0.29
SNU13-201ENST00000215956 EFHBQ8N7U6 833 aa13.25□□□□□ -0.29
SNU13-201ENST00000215956 LSM14BQ9BX40 385 aaKnown RBP13.25□□□□□ -0.29
SNU13-201ENST00000215956 TMEM134Q9H6X4 195 aa13.25□□□□□ -0.29
SNU13-201ENST00000215956 XPNPEP1Q9NQW7 623 aa13.25□□□□□ -0.29
SNU13-201ENST00000215956 FAM86C1Q9NVL1 165 aa13.25□□□□□ -0.29
SNU13-201ENST00000215956 TRMT1Q9NXH9 659 aaKnown RBP13.25□□□□□ -0.29
SNU13-201ENST00000215956 ERAP1Q9NZ08 941 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms