RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 LAMC1P11047 1609 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 RTN2O75298 545 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 LRRC31Q6UY01 552 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 BZW1Q7L1Q6 419 aaKnown RBP14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 ZIM3Q96PE6 472 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 PVALEFA0A1B0GWK0 134 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 CTDNEP1O95476 244 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 GYS1P13807 737 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 BRD2P25440 801 aaKnown RBP14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 OLFML2BQ68BL8 750 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 NSUN4Q96CB9 384 aaKnown RBP14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 TRIM9Q9C026 710 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 HOXC10Q9NYD6 342 aa14.35□□□□□ -0.11
TGFBR3-201ENST00000212355 LMNAP02545 664 aaKnown RBP14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 PRKCBP05771 671 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 LRRC74AQ0VAA2 488 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 PHF20Q9BVI0 1012 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 EPB41L4AQ9HCS5 686 aaPredicted RBP14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 TRIM33Q9UPN9 1127 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 TFDP2Q14188 446 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 RTKN2Q8IZC4 609 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 SHROOM2Q13796 1616 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 ADGRL3Q9HAR2 1447 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 GFAPP14136 432 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 KIRREL3Q8IZU9 778 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 RNF181Q9P0P0 153 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 GRID2IPA4D2P6 1211 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 MYBL1P10243 752 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 C11orf96Q7Z7L8 435 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 INPP5DQ92835 1189 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 CCT8L2Q96SF2 557 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 TBC1D22BQ9NU19 505 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 SLC8A2Q9UPR5 921 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 SNX5Q9Y5X3 404 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 LOC100653049A0A140TA62 436 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 ANO9A1A5B4 782 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 CHUKO15111 745 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 KRT34O76011 436 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 GYPCP04921 128 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 ANTXR2P58335 489 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 TPI1P60174 286 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 BTBD8Q5XKL5 378 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 DDX53Q86TM3 631 aaKnown RBP14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 FAM20AQ96MK3 541 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 RBM15Q96T37 977 aaKnown RBP eCLIP14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 YIPF2Q9BWQ6 316 aa14.34□□□□□ -0.11
TGFBR3-201ENST00000212355 RECQLP46063 649 aaPredicted RBP14.33□□□□□ -0.11
TGFBR3-201ENST00000212355 PWP1Q13610 501 aa14.33□□□□□ -0.11
TGFBR3-201ENST00000212355 BAATQ14032 418 aaPredicted RBP14.33□□□□□ -0.11
TGFBR3-201ENST00000212355 EFHBQ8N7U6 833 aa14.33□□□□□ -0.11
TGFBR3-201ENST00000212355 TC2NQ8N9U0 490 aa14.33□□□□□ -0.11
TGFBR3-201ENST00000212355 NAF1Q96HR8 494 aaKnown RBP14.33□□□□□ -0.11
TGFBR3-201ENST00000212355 CAPN10Q9HC96 672 aa14.33□□□□□ -0.11
TGFBR3-201ENST00000212355 JPH1Q9HDC5 661 aaPredicted RBP14.33□□□□□ -0.11
TGFBR3-201ENST00000212355 NARFQ9UHQ1 456 aa14.33□□□□□ -0.11
TGFBR3-201ENST00000212355 TARSP26639 723 aaKnown RBP14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 TNFAIP2Q03169 654 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 FUT11Q495W5 492 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 BTNL9Q6UXG8 535 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 MIER2Q8N344 545 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 PPHLN1Q8NEY8 458 aaKnown RBP14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 TSSK1BQ9BXA7 367 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 EPN3Q9H201 632 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 METTL5Q9NRN9 209 aaKnown RBP14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 NEU2Q9Y3R4 380 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 FLT1P17948 1338 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 NEO1Q92859 1461 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 XPO1O14980 1071 aaKnown RBP14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 SPTLC1O15269 473 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 AKAP10O43572 662 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 TLR2O60603 784 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 UCHL3P15374 230 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 COMTP21964 271 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 KCNA4P22459 653 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 TTLL4Q14679 1199 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 NFIXQ14938 502 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 NR1I3Q14994 352 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 ATG4AQ8WYN0 398 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 SGF29Q96ES7 293 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 SEC16BQ96JE7 1060 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 PLEKHA5Q9HAU0 1116 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 TOPORSQ9NS56 1045 aaPredicted RBP14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 ZFATQ9P243 1243 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 APEX2Q9UBZ4 518 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 PPP3CCP48454 512 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 OR6J1Q8NGC5 347 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 PABPC5Q96DU9 382 aaKnown RBP14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 KLK14Q9P0G3 267 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 ARHGEF5Q12774 1597 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 ADCY3O60266 1144 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 KYNUQ16719 465 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 EML3Q32P44 896 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 RABGAP1LQ5R372 815 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 MROH9Q5TGP6 573 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 FAM71DQ8N9W8 422 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 TTC13Q8NBP0 860 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 C20orf96Q9NUD7 363 aaPredicted RBP14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 MAD2L2Q9UI95 211 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 CLTCL1P53675 1640 aa14.33□□□□□ -0.12
TGFBR3-201ENST00000212355 RSPH10B2B2RC85 870 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms