RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 HIST3H2AQ7L7L0 130 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 DDX17Q92841 729 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 HIST1H2ACQ93077 130 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.62□□□□□ -1.83
NEB-201ENST00000172853 USP17L15C9J2P7 530 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 USP17L13C9JLJ4 530 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 USP17L11C9JVI0 530 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 USP17L18D6R9N7 530 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 USP17L22D6RA61 530 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 USP17L17D6RBQ6 530 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 USP17L19D6RCP7 530 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 USP17L20D6RJB6 530 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 RPS6KA5O75582 802 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 TJP3O95049 919 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 PSMA2P25787 234 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 USP17L24Q0WX57 530 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 SPATA33Q96N06 139 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 SH3GL3Q99963 347 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 OGFRQ9NZT2 677 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 C9orf84Q5VXU9 1444 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 GPR182O15218 404 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 KRT37O76014 449 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 SDSP20132 328 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 POU5F1BQ06416 359 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 XRCC4Q13426 336 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 MESDQ14696 234 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 MORF4L2Q15014 288 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 MTHFD1LQ6UB35 978 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 VN1R5Q7Z5H4 357 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 OR6P1Q8NGX9 317 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 OLFM1Q99784 485 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 MRGBPQ9NV56 204 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 TMEM39AQ9NV64 488 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 SOHLH2Q9NX45 425 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 ZNF644Q9H582 1327 aaPredicted RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 MGRN1O60291 552 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 AP2B1P63010 937 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.62□□□□□ -1.83
NEB-201ENST00000172853 TWF1Q12792 350 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 RPTNQ6XPR3 784 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 PCSK9Q8NBP7 692 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 NKX2-3Q8TAU0 364 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 MKNK1Q9BUB5 465 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 MCM8Q9UJA3 840 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 USP20Q9Y2K6 914 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 GDAQ9Y2T3 454 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 ZNF804BA4D1E1 1349 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 SYNGAP1Q96PV0 1343 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 NUP160Q12769 1436 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 PFDN1O60925 122 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 RASA1P20936 1047 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 MCPH1Q8NEM0 835 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 VPS9D1Q9Y2B5 631 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 ZHX2Q9Y6X8 837 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 A0A0B4J269 797 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 A0A0J9YVX5 310 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 LAD1O00515 517 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 KCNK3O14649 394 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 TUBB3Q13509 450 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 MACC1Q6ZN28 852 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 USP7Q93009 1102 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 CCDC51Q96ER9 411 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 INTS2Q9H0H0 1204 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.62□□□□□ -1.83
NEB-201ENST00000172853 RPTORQ8N122 1335 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 TARBP1Q13395 1621 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 ERVV-2B6SEH9 535 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 MOCS2O96007 188 aaPredicted RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 CKBP12277 381 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 SUZ12Q15022 739 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 RD3Q7Z3Z2 195 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 CYP4Z2PQ8N1L4 340 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 RSPH1Q8WYR4 309 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 OMDQ99983 421 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 PCDHB15Q9Y5E8 787 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 HEATR9A2RTY3 570 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 LRRD1A4D1F6 860 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 TMEM191CA6NGB0 347 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 CELF2O95319 508 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 CD58P19256 250 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 CXCR2P25025 360 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 TBL3Q12788 808 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 ZNF284Q2VY69 593 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 FAM47AQ5JRC9 791 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 HEATR6Q6AI08 1181 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 RAVER2Q9HCJ3 691 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 RNMTO43148 476 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 PJA2O43164 708 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 CHP2O43745 196 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 KPNA6O60684 536 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 AVILO75366 819 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 KLRC2P26717 231 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 SDC4P31431 198 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 CHRNA3P32297 505 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 THOP1P52888 689 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 PPARAQ07869 468 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 ZNF177Q13360 481 aaPredicted RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 TBC1D10BQ4KMP7 808 aaPredicted RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 ARHGAP45Q92619 1136 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms