RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 RCN2Q14257 317 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 SEC14L1Q92503 715 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 ART4Q93070 314 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 WDR18Q9BV38 432 aa17.82■□□□□ 0.44
CTDP1-201ENST00000075430 NDUFB10O96000 172 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 UBTFL6P0CB48 400 aaPredicted RBP17.81■□□□□ 0.44
CTDP1-201ENST00000075430 RASA3Q14644 834 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 VPS52Q8N1B4 723 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 UTP4Q969X6 686 aaKnown RBP17.81■□□□□ 0.44
CTDP1-201ENST00000075430 TRABDQ9H4I3 376 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 ATF5Q9Y2D1 282 aaPredicted RBP17.81■□□□□ 0.44
CTDP1-201ENST00000075430 A0A1B0GUL6 1792 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 DOCK2Q92608 1830 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 LRRD1A4D1F6 860 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 GM2AP17900 193 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 TAC1P20366 129 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 CTNNA2P26232 953 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 MIS18BP1Q6P0N0 1132 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 PADI6Q6TGC4 694 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 ARHGAP27Q6ZUM4 889 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 LMNTD2Q8IXW0 634 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 EPS8L1Q8TE68 723 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 MCUR1Q96AQ8 359 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 SNF8Q96H20 258 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 ZFATQ9P243 1243 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 POLRMTO00411 1230 aaKnown RBP17.81■□□□□ 0.44
CTDP1-201ENST00000075430 KITP10721 976 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 ALDH3A1P30838 453 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 PEX5P50542 639 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 IRX4P78413 519 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 ORC2Q13416 577 aaPredicted RBP17.81■□□□□ 0.44
CTDP1-201ENST00000075430 PLA2G4FQ68DD2 849 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 SP8Q8IXZ3 490 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 FAM13CQ8NE31 585 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 POMGNT1Q8WZA1 660 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 TMOD2Q9NZR1 351 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 CHKBQ9Y259 395 aa17.81■□□□□ 0.44
CTDP1-201ENST00000075430 hCG_1984214I3L0E3 225 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 ATP5DP30049 168 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 SPOPLQ6IQ16 392 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 APOBEC3HQ6NTF7 200 aaKnown RBP17.8■□□□□ 0.44
CTDP1-201ENST00000075430 STXBP4Q6ZWJ1 553 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 ZNF713Q8N859 430 aaPredicted RBP17.8■□□□□ 0.44
CTDP1-201ENST00000075430 HIPK4Q8NE63 616 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 CCHCR1Q8TD31 782 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 TAS1R2Q8TE23 839 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 SEMA4DQ92854 862 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 LENG9Q96B70 501 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 FHDC1Q9C0D6 1143 aaPredicted RBP17.8■□□□□ 0.44
CTDP1-201ENST00000075430 FBXO28Q9NVF7 368 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 ARMCX1Q9P291 453 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 ZMYM2Q9UBW7 1377 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 MARCOQ9UEW3 520 aaPredicted RBP17.8■□□□□ 0.44
CTDP1-201ENST00000075430 SLC16A3O15427 465 aaKnown RBP17.8■□□□□ 0.44
CTDP1-201ENST00000075430 UNC5CO95185 931 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 MYCLP12524 364 aaPredicted RBP17.8■□□□□ 0.44
CTDP1-201ENST00000075430 SLC8A3P57103 927 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 GPS1Q13098 491 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 EFTUD2Q15029 972 aaKnown RBP eCLIP17.8■□□□□ 0.44
CTDP1-201ENST00000075430 KREMEN1Q96MU8 473 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 SMC6Q96SB8 1091 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 WNT8AQ9H1J5 351 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 PI4KBQ9UBF8 816 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 ZFP69BQ9UJL9 534 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 SMCHD1A6NHR9 2005 aa17.8■□□□□ 0.44
CTDP1-201ENST00000075430 ABCA3Q99758 1704 aa17.79■□□□□ 0.44
CTDP1-201ENST00000075430 PLCH1Q4KWH8 1693 aa17.79■□□□□ 0.44
CTDP1-201ENST00000075430 MAGEA4P43358 317 aa17.79■□□□□ 0.44
CTDP1-201ENST00000075430 PTDSS1P48651 473 aaKnown RBP17.79■□□□□ 0.44
CTDP1-201ENST00000075430 SYDE2Q5VT97 1194 aa17.79■□□□□ 0.44
CTDP1-201ENST00000075430 C1orf186Q6ZWK4 172 aa17.79■□□□□ 0.44
CTDP1-201ENST00000075430 RAB3IPQ96QF0 476 aaPredicted RBP17.79■□□□□ 0.44
CTDP1-201ENST00000075430 PLVAPQ9BX97 442 aa17.79■□□□□ 0.44
CTDP1-201ENST00000075430 HSPBP1Q9NZL4 362 aa17.79■□□□□ 0.44
CTDP1-201ENST00000075430 PCYOX1Q9UHG3 505 aa17.79■□□□□ 0.44
CTDP1-201ENST00000075430 CNOT7Q9UIV1 285 aaKnown RBP17.79■□□□□ 0.44
CTDP1-201ENST00000075430 NCANO14594 1321 aa17.79■□□□□ 0.44
CTDP1-201ENST00000075430 FAM47DPA6NHR8 397 aa17.79■□□□□ 0.44
CTDP1-201ENST00000075430 ATP4AP20648 1035 aa17.79■□□□□ 0.44
CTDP1-201ENST00000075430 HYIQ5T013 277 aa17.79■□□□□ 0.44
CTDP1-201ENST00000075430 LVRNQ6Q4G3 990 aa17.79■□□□□ 0.44
CTDP1-201ENST00000075430 KRT27Q7Z3Y8 459 aa17.79■□□□□ 0.44
CTDP1-201ENST00000075430 PLEKHO2Q8TD55 490 aa17.79■□□□□ 0.44
CTDP1-201ENST00000075430 TTC17Q96AE7 1141 aa17.79■□□□□ 0.44
CTDP1-201ENST00000075430 MKNK1Q9BUB5 465 aa17.79■□□□□ 0.44
CTDP1-201ENST00000075430 MAPK13O15264 365 aa17.78■□□□□ 0.44
CTDP1-201ENST00000075430 SLC1A5Q15758 541 aa17.78■□□□□ 0.44
CTDP1-201ENST00000075430 CRELD2Q6UXH1 353 aaPredicted RBP17.78■□□□□ 0.44
CTDP1-201ENST00000075430 ANKRD35Q8N283 1001 aa17.78■□□□□ 0.44
CTDP1-201ENST00000075430 SLC25A41Q8N5S1 370 aa17.78■□□□□ 0.44
CTDP1-201ENST00000075430 GBP7Q8N8V2 638 aaPredicted RBP17.78■□□□□ 0.44
CTDP1-201ENST00000075430 JDP2Q8WYK2 163 aa17.78■□□□□ 0.44
CTDP1-201ENST00000075430 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.78■□□□□ 0.44
CTDP1-201ENST00000075430 ARHGEF3Q9NR81 526 aa17.78■□□□□ 0.44
CTDP1-201ENST00000075430 FBXO6Q9NRD1 293 aaPredicted RBP17.78■□□□□ 0.44
CTDP1-201ENST00000075430 TXLNGQ9NUQ3 528 aa17.78■□□□□ 0.44
CTDP1-201ENST00000075430 CDH16O75309 829 aa17.78■□□□□ 0.44
CTDP1-201ENST00000075430 SMNDC1O75940 238 aaKnown RBP eCLIP17.78■□□□□ 0.44
CTDP1-201ENST00000075430 LINGO3P0C6S8 592 aa17.78■□□□□ 0.44
CTDP1-201ENST00000075430 CYP11B1P15538 503 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms