RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 TMEM63BQ5T3F8 832 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 FAM102BQ5T8I3 360 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 ACAD10Q6JQN1 1059 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 B3GNT9Q6UX72 402 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 GLIS2Q9BZE0 524 aaPredicted RBP14.96□□□□□ -0.01
USH1C-201ENST00000005226 DCLK3Q9C098 648 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 KIF9Q9HAQ2 790 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.96□□□□□ -0.01
USH1C-201ENST00000005226 USTQ9Y2C2 406 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 KLRG2A4D1S0 409 aaPredicted RBP14.96□□□□□ -0.01
USH1C-201ENST00000005226 UPP2O95045 317 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 PLS3P13797 630 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 MSH2P43246 934 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 DACT2Q5SW24 774 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 PAXIP1Q6ZW49 1069 aaPredicted RBP14.96□□□□□ -0.01
USH1C-201ENST00000005226 CDAN1Q8IWY9 1227 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 POMGNT1Q8WZA1 660 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 RSRC1Q96IZ7 334 aaKnown RBP14.96□□□□□ -0.01
USH1C-201ENST00000005226 SLC24A3Q9HC58 644 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 PRKAG3Q9UGI9 489 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 MROH7Q68CQ1 1323 aa14.96□□□□□ -0.02
USH1C-201ENST00000005226 GSTTP1A0A1W2PQM5 241 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 CLRN2A0PK11 232 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 NEBLO76041 1014 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 TAC1P20366 129 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 WDR4P57081 412 aaKnown RBP14.95□□□□□ -0.02
USH1C-201ENST00000005226 LDHDQ86WU2 507 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 PASD1Q8IV76 773 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 GLIS1Q8NBF1 620 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 TMEM237Q96Q45 408 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 MXRA8Q9BRK3 442 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 SLCO1B3Q9NPD5 702 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 ARHGEF3Q9NR81 526 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 ADAM22Q9P0K1 906 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.95□□□□□ -0.02
USH1C-201ENST00000005226 PIAS1O75925 651 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 ZSCAN5DPP0CG00 497 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 CD58P19256 250 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 PSEN1P49768 467 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 DNAJC3Q13217 504 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 ATP13A4Q4VNC1 1196 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 CRELD2Q6UXH1 353 aaPredicted RBP14.95□□□□□ -0.02
USH1C-201ENST00000005226 MORC4Q8TE76 937 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 ETNK1Q9HBU6 452 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 KCND2Q9NZV8 630 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 UVRAGQ9P2Y5 699 aa14.95□□□□□ -0.02
USH1C-201ENST00000005226 A0A1B0GUA9 196 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 PI4K2BG5E9Z4 385 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 TAS2R40P59535 323 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 PARD3BQ8TEW8 1205 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 PITPNM3Q9BZ71 974 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 RXFP1Q9HBX9 757 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 HOMER2Q9NSB8 354 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 NKIRAS1Q9NYS0 192 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 RASA4BC9J798 803 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 POC1B-GALNT4F8VUJ3 575 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 P4HA2O15460 535 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 DHX15O43143 795 aaKnown RBP14.94□□□□□ -0.02
USH1C-201ENST00000005226 RASA4O43374 803 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 ETS1P14921 441 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 PTK6Q13882 451 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 MYBPC2Q14324 1141 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 CLEC16AQ2KHT3 1053 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 IZUMO3Q5VZ72 239 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 KRT39Q6A163 491 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 KCTD17Q8N5Z5 321 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 UTP4Q969X6 686 aaKnown RBP14.94□□□□□ -0.02
USH1C-201ENST00000005226 NT5C1BQ96P26 610 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 FAM167BQ9BTA0 163 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 RAB20Q9NX57 234 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 NOP53Q9NZM5 478 aaKnown RBP14.94□□□□□ -0.02
USH1C-201ENST00000005226 KLHL14Q9P2G3 628 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 NKX1-2Q9UD57 310 aaPredicted RBP14.94□□□□□ -0.02
USH1C-201ENST00000005226 SCAF8Q9UPN6 1271 aaKnown RBP14.94□□□□□ -0.02
USH1C-201ENST00000005226 LTBP1Q14766 1721 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 NFIBO00712 420 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 ECE2O60344 883 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 P4HBP07237 508 aaKnown RBP14.94□□□□□ -0.02
USH1C-201ENST00000005226 ALADP13716 330 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 PDE6BP35913 854 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 CRYMQ14894 314 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 KAZNQ674X7 775 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 SV2AQ7L0J3 742 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 ASRGL1Q7L266 308 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 C7orf43Q8WVR3 580 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 DDX27Q96GQ7 796 aaKnown RBP14.94□□□□□ -0.02
USH1C-201ENST00000005226 MYLK2Q9H1R3 596 aa14.94□□□□□ -0.02
USH1C-201ENST00000005226 KRT10P13645 584 aa14.93□□□□□ -0.02
USH1C-201ENST00000005226 TARSP26639 723 aaKnown RBP14.93□□□□□ -0.02
USH1C-201ENST00000005226 CNGA1P29973 690 aa14.93□□□□□ -0.02
USH1C-201ENST00000005226 YWHABP31946 246 aaKnown RBP14.93□□□□□ -0.02
USH1C-201ENST00000005226 GTF2BQ00403 316 aa14.93□□□□□ -0.02
USH1C-201ENST00000005226 FASTKD3Q14CZ7 662 aaKnown RBP14.93□□□□□ -0.02
USH1C-201ENST00000005226 SPOPLQ6IQ16 392 aa14.93□□□□□ -0.02
USH1C-201ENST00000005226 GSTA5Q7RTV2 222 aa14.93□□□□□ -0.02
USH1C-201ENST00000005226 PODNQ7Z5L7 613 aa14.93□□□□□ -0.02
USH1C-201ENST00000005226 MCOLN2Q8IZK6 566 aa14.93□□□□□ -0.02
USH1C-201ENST00000005226 CPXCR1Q8N123 301 aa14.93□□□□□ -0.02
USH1C-201ENST00000005226 C4orf33Q8N1A6 199 aa14.93□□□□□ -0.02
USH1C-201ENST00000005226 ATL2Q8NHH9 583 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms