RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 TBC1D12O60347 775 aa10.96□□□□□ -0.65
NIPAL3-201ENST00000003912 RGS7P49802 495 aa10.96□□□□□ -0.65
NIPAL3-201ENST00000003912 RUSC1Q9BVN2 902 aa10.96□□□□□ -0.65
NIPAL3-201ENST00000003912 PCDHB2Q9Y5E7 798 aa10.96□□□□□ -0.65
NIPAL3-201ENST00000003912 MSCO60682 206 aa10.96□□□□□ -0.65
NIPAL3-201ENST00000003912 NOL3O60936 208 aaKnown RBP10.96□□□□□ -0.65
NIPAL3-201ENST00000003912 SRGAP2O75044 1071 aa10.96□□□□□ -0.65
NIPAL3-201ENST00000003912 PDGFRAP16234 1089 aa10.96□□□□□ -0.65
NIPAL3-201ENST00000003912 IQSEC1Q6DN90 963 aa10.96□□□□□ -0.65
NIPAL3-201ENST00000003912 USP49Q70CQ1 688 aa10.96□□□□□ -0.65
NIPAL3-201ENST00000003912 TLK2Q86UE8 772 aa10.96□□□□□ -0.65
NIPAL3-201ENST00000003912 ANKS1AQ92625 1134 aa10.96□□□□□ -0.65
NIPAL3-201ENST00000003912 RRAGDQ9NQL2 400 aaPredicted RBP10.96□□□□□ -0.65
NIPAL3-201ENST00000003912 UVRAGQ9P2Y5 699 aa10.96□□□□□ -0.65
NIPAL3-201ENST00000003912 AK9Q5TCS8 1911 aa10.96□□□□□ -0.65
NIPAL3-201ENST00000003912 DFFAO00273 331 aa10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 MED24O75448 989 aa10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 KRT37O76014 449 aa10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 UCHL3P15374 230 aa10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 GNGT1P63211 74 aa10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 MAP3K21Q5TCX8 1036 aa10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 JADE1Q6IE81 842 aa10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 TAF2Q6P1X5 1199 aa10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 CACNA2D3Q8IZS8 1091 aa10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 INTS9Q9NV88 658 aaKnown RBP10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 ITGB3P05106 788 aa10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 RAG1P15918 1043 aa10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 SSTR3P32745 418 aaPredicted RBP10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 EIF3BP55884 814 aaKnown RBP10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 GRB10Q13322 594 aa10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 ACVR2BQ13705 512 aa10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 KIFC3Q9BVG8 833 aa10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 RABEP2Q9H5N1 569 aa10.96□□□□□ -0.66
NIPAL3-201ENST00000003912 VTNP04004 478 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 FAM200BP0CF97 657 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 TAC1P20366 129 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 TTC23LQ6PF05 361 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 CATSPERGQ6ZRH7 1159 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 ZNF677Q86XU0 584 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 RIOX2Q8IUF8 465 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 ZFPM1Q8IX07 1006 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 CHMP6Q96FZ7 201 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 PDE11AQ9HCR9 933 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 AGPAT3Q9NRZ7 376 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 BFARQ9NZS9 450 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 KLK14Q9P0G3 267 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 B3GAT3O94766 335 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 CHEK2O96017 543 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 ZNF286BP0CG31 522 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 ATP1A2P50993 1020 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 RAB27AP51159 221 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 GRIK4Q16099 956 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 LY6KQ17RY6 165 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 MMEL1Q495T6 779 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 TDRD10Q5VZ19 366 aaKnown RBP10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 SLC30A10Q6XR72 485 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 DDX53Q86TM3 631 aaKnown RBP10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 FAM49BQ9NUQ9 324 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 MAP3K7O43318 606 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 TOM1L1O75674 476 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 EFHC1Q5JVL4 640 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 KSR1Q8IVT5 923 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 SENP7Q9BQF6 1050 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 SYT17Q9BSW7 474 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 RNF208Q9H0X6 261 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 SAYSD1Q9NPB0 183 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 DBR1Q9UK59 544 aaKnown RBP10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 RASGRF2O14827 1237 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 ZMYND10O75800 440 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 GARTP22102 1010 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 CEP120Q8N960 986 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 DPP7Q9UHL4 492 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 BAG5Q9UL15 447 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 CABYRO75952 493 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 URODP06132 367 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 NPTX2P47972 431 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 MFSD10Q14728 455 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 NFRKBQ6P4R8 1299 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 FRA10AC1Q70Z53 315 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 ENTPD7Q9NQZ7 604 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 ABCF3Q9NUQ8 709 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 TMEM39AQ9NV64 488 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 SETD4Q9NVD3 440 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 KANSL3Q9P2N6 904 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 DSEQ9UL01 958 aa10.95□□□□□ -0.66
NIPAL3-201ENST00000003912 ZWINTO95229 277 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 INSRRP14616 1297 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 CHRNA3P32297 505 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 RHBDL3P58872 404 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 SP3Q02447 781 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 PIGHQ14442 188 aaPredicted RBP10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 TRAPPC11Q7Z392 1133 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 CDR2LQ86X02 465 aaPredicted RBP10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 MYPNQ86TC9 1320 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 A0A1B0GTH6 734 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 GLTPD2A6NH11 291 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 PIK3R2O00459 728 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 C2CD2LO14523 706 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 IRF6O14896 467 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 PQBP1O60828 265 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms