RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Panx2Q6IMP4 677 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Olfr23Q7TRX4 325 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Tmem260Q8BMD6 703 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Pkn2Q8BWW9 983 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Taf2Q8C176 1104 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Gpc3Q8CFZ4 579 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Ap3m2Q8R2R9 418 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Klhl20Q8VCK5 604 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Csde1Q91W50 798 aaKnown RBP13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Ttc1Q91Z38 292 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Socs4Q91ZA6 436 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Egfl7Q9QXT5 275 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Wdr46Q9Z0H1 622 aaKnown RBP13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Wdr72D3YYM4 1114 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Kif3cO35066 796 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 TxkP42682 527 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 SpoplQ2M2N2 392 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Dusp11Q6NXK5 321 aaKnown RBP13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Fbxl5Q8C2S5 690 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Spata16Q8C636 571 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Q8CEZ4 452 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Rftn2Q8CHX7 500 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Trpv6Q91WD2 767 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Smc1aQ9CU62 1233 aaKnown RBP13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Chst7Q9EP78 484 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 H2-OaQ9QWV1 250 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Rnf25Q9QZR0 456 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Uso1Q9Z1Z0 959 aaKnown RBP13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Scn1aA2APX8 2009 aa13.17□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Ttc13A0A1L1SSC7 844 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 DgkhD3YXJ0 1156 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Tpp1O89023 562 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Uri1Q3TLD5 531 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Has1Q61647 583 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 GartQ64737 1010 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 B3glctQ8BHT6 489 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Zfp120Q8BZW4 436 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Wdr11Q8K1X1 1223 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Mzb1Q9D8I1 188 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Dnajc7Q9QYI3 494 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Ercc4Q9QZD4 917 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Unc13dB2RUP2 1085 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Vmn2r15L7N2A0 855 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Usp10P52479 792 aaKnown RBP13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Armcx2Q6A058 784 aaKnown RBP13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Reps2Q80XA6 521 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Stxbp5Q8K400 1152 aaKnown RBP13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Rem2Q8VEL9 341 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Socs7Q8VHQ2 579 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 DgkeQ9R1C6 564 aa13.16□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Ptpn3A2ALK8 913 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 GmnnO88513 206 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Alkbh1P0CB42 389 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Tbxas1P36423 533 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Aldh2P47738 519 aaKnown RBP13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Ccdc33Q3ULW6 985 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 CybbQ61093 570 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Ovgp1Q62010 721 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Ttc39bQ8BYY4 617 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 ClmnQ8C5W0 1052 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Atp1a1Q8VDN2 1023 aaKnown RBP13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Cse1lQ9ERK4 971 aaKnown RBP13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Efcab12V9GXH0 673 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Ldlrad1D3YYZ1 218 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Trim30bE9PVL6 203 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 IkbkbO88351 757 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Psen1P49769 467 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Senp1P59110 640 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Kcnq1P97414 668 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 ChpfQ6IQX7 774 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Lrfn2Q80TG9 788 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 AsphQ8BSY0 741 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Zmat2Q9CPW7 199 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Rbm31yQ9D3U4 565 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 ChmQ9QXG2 665 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Scnn1bQ9WU38 638 aa13.15□□□□□ -0.3
Ddx55-202ENSMUST00000111438 Pramef17A2ASJ1 475 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Vmn2r121A2BE32 847 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Odf2A3KGV1 830 aaKnown RBP13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Fpr-rs4A4FUQ5 323 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Znf800Q0VEE6 662 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Dpcr1Q3TNW5 500 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Snx25Q3ZT31 840 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Fam109aQ8BH49 266 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Slc9a7Q8BLV3 726 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Dact1Q8R4A3 778 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Fam133bQ9CVI2 245 aaKnown RBP13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Cwc15Q9JHS9 229 aaKnown RBP13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Extl1Q9JKV7 669 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Vstm4T1NXB5 319 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Hnrnph3D3Z3N4 346 aaKnown RBP13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Gm3739L7N296 216 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Myo1aO88329 1043 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Gprc5aQ8BHL4 356 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 PisdQ8BSF4 406 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Hgh1Q8C3I8 393 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Gm5591Q8CDK1 855 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Znf131Q8K3J5 619 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Cgref1Q8R1U2 281 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Zkscan3Q91VW9 553 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms