RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Sppl3Q9CUS9 384 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 JmyQ9QXM1 983 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Cog1Q9Z160 980 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Dhtkd1A2ATU0 921 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Unc13dB2RUP2 1085 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Magea1O89006 320 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 ProcP33587 460 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Sash1P59808 1230 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Luc7l3Q5SUF2 432 aaKnown RBP13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Asap3Q5U464 904 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Sema5bQ60519 1093 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Nr2e1Q64104 385 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Pla2g4cQ64GA5 597 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Zcchc2Q69ZB8 1166 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Slc4a7Q8BTY2 1034 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Usp38Q8BW70 1042 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Ccdc169Q8BXX9 214 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Nrbp2Q91V36 499 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 BrdtQ91Y44 956 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Ttc1Q91Z38 292 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Polr3fQ921X6 316 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Rpap3Q9D706 660 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Magea2Q9R2A2 320 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Znf536Q8K083 1302 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Diaph2O70566 1098 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Pik3caP42337 1068 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Dab2P98078 766 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 C2cd2lQ80X80 706 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Wdr35Q8BND3 1181 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Ccdc134Q8C7V8 229 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Ctage5Q8R311 779 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Rnf6Q9DBU5 667 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Olig1Q9JKN5 260 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Astn1Q61137 1302 aa13.08□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Gsg1l2M0QWL6 290 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 TyrobpO54885 114 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Becn2P0DM65 447 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 FlgP11088 336 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 RxrbP28704 520 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Ly9Q01965 654 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Rhox12Q4TU81 186 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Lilrb4Q64281 335 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Inpp4bQ6P1Y8 924 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Depdc1bQ8BH88 529 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 AsphQ8BSY0 741 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Usp37Q8C0R0 979 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 PpatQ8CIH9 517 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Rpn1Q91YQ5 608 aaKnown RBP13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Dpp7Q9ET22 506 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Gm11549A0A286YD83 63 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Arhgef10lA2AWP8 1280 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 R3hdm1E9Q9Q2 1135 aaKnown RBP13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Rps6ka3P18654 740 aaKnown RBP13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Ccdc110Q3V125 848 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Ints2Q80UK8 1198 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Klhl11Q8CE33 709 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Ssh3Q8K330 649 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Senp2Q91ZX6 588 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 PrameQ9D4Z5 464 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Lrrc34Q9DAM1 415 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Tcirg1Q9JHF5 834 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Pdzrn4E9PUZ9 1014 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Uhmk1P97343 419 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Tmem63bQ3TWI9 832 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Krt12Q64291 487 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Serpinb3dQ6UKZ0 387 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Gigyf2Q6Y7W8 1291 aaKnown RBP13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Gbp9Q8BTS3 619 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Xpo6Q924Z6 1125 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Asb11Q9CQ31 323 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Emc2Q9CRD2 297 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Ankef1Q9D2J7 775 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Atp6v1e2Q9D593 226 aa13.07□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Fbf1A2A870 1173 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Scgb2b7D3YYY1 112 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Maml3D4QGC2 1135 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Zfp266E9Q2S7 604 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Zfp457L7N1X4 647 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Cdk14O35495 469 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Nucks1Q80XU3 234 aaKnown RBP13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 DcakdQ8BHC4 231 aaKnown RBP13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Pkn2Q8BWW9 983 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Vps36Q91XD6 386 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Tnpo2Q99LG2 887 aaKnown RBP13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 CalcbQ99MP3 130 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Ctnnbl1Q9CWL8 563 aaKnown RBP13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Clca3bE9PUL3 1044 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 DgkkE9Q7N4 1118 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 P01734 135 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Ephb4P54761 987 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Kmt5aQ2YDW7 349 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Wdr18Q4VBE8 431 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Mea1Q64327 174 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Gcfc2Q8BKT3 769 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Ccdc87Q8CDL9 855 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Sugp1Q8CH02 643 aaKnown RBP13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Slc26a6Q8CIW6 758 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Wrap53Q8VC51 532 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Cdk9Q99J95 372 aa13.06□□□□□ -0.32
Vamp1-203ENSMUST00000100942 Ino80bQ99PT3 375 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms