RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Tmc5Q32NZ6 967 aa10.77□□□□□ -0.68
Lig4-201ENSMUST00000095476 Klra4Q60651 263 aa10.77□□□□□ -0.68
Lig4-201ENSMUST00000095476 WlsQ6DID7 541 aa10.77□□□□□ -0.68
Lig4-201ENSMUST00000095476 Tyw3Q8BSA9 257 aa10.77□□□□□ -0.68
Lig4-201ENSMUST00000095476 Ttc16Q8C1F5 767 aa10.77□□□□□ -0.68
Lig4-201ENSMUST00000095476 Phc3Q8CHP6 981 aa10.77□□□□□ -0.68
Lig4-201ENSMUST00000095476 Homer3Q99JP6 356 aa10.77□□□□□ -0.68
Lig4-201ENSMUST00000095476 CygbQ9CX80 190 aa10.77□□□□□ -0.68
Lig4-201ENSMUST00000095476 Serbp1Q9CY58 407 aaKnown RBP10.77□□□□□ -0.68
Lig4-201ENSMUST00000095476 Ppp1r2Q9DCL8 206 aa10.77□□□□□ -0.68
Lig4-201ENSMUST00000095476 Kcnq5Q9JK45 933 aa10.77□□□□□ -0.68
Lig4-201ENSMUST00000095476 Edf1Q9JMG1 148 aaKnown RBP10.77□□□□□ -0.68
Lig4-201ENSMUST00000095476 Arl10Q9QXJ4 243 aa10.77□□□□□ -0.68
Lig4-201ENSMUST00000095476 Znf541Q0GGX2 1363 aa10.77□□□□□ -0.68
Lig4-201ENSMUST00000095476 CluhQ5SW19 1315 aa10.77□□□□□ -0.68
Lig4-201ENSMUST00000095476 Ccdc194A0A140LIT1 234 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Lrrc63A6H694 637 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Trappc11B2RXC1 1133 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Tbc1d10aP58802 500 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 HnrnpdQ60668 355 aaKnown RBP10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Chi3l1Q61362 389 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Rnf220Q6PDX6 566 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Palm2Q8BR92 376 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 AbraQ8BUZ1 375 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 CrebzfQ91ZR3 358 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Rbm6S4R1W5 1118 aaKnown RBP10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Xirp1O70373 1129 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 ChrngP04760 519 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Adcy6Q01341 1165 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Ceacam5Q3UKK2 947 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Gm4952Q5FW57 296 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 ScocQ78YZ6 125 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Deup1Q7M6Y5 601 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Mfn1Q811U4 741 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Clca2Q8BG22 942 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Sp8Q8BMJ8 486 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Tph2Q8CGV2 488 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Gnl3Q8CI11 538 aaKnown RBP10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Sash3Q8K352 380 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 HnrnprQ8VHM5 632 aaKnown RBP10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Ttc33Q9D6K7 262 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 AglF8VPN4 1532 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 MypnQ5DTJ9 1315 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 PfasQ5SUR0 1337 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Pja1O55176 578 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Bmp2P21274 394 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 GabrdP22933 449 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Psmd7P26516 321 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Slc12a1P55014 1095 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Hsph1Q61699 858 aaKnown RBP10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Slc6a15Q8BG16 729 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Nup107Q8BH74 926 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 PaoxQ8C0L6 504 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Olfr805Q8VFI4 319 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 Tnip2Q99JG7 430 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 NvlQ9DBY8 855 aaKnown RBP10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 ParvaQ9EPC1 372 aa10.77□□□□□ -0.69
Lig4-201ENSMUST00000095476 L3mbtl1A2A5N8 826 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Rgs2O08849 211 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Hcn2O88703 863 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 LdhbP16125 334 aaKnown RBP10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Q3KNL4 93 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Ccdc154Q6RUT8 657 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Btnl1Q7TST0 509 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Map10Q8BJS7 891 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Znrd1-asQ8R0E5 213 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Scrn2Q8VCA8 425 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Rmdn1Q9DCV4 305 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Sertad1Q9JL10 236 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Slc22a3Q9WTW5 551 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Gm29554A0A087WNW4 188 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Zfp105G3X9I0 524 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Cdc25aP48964 514 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 UrosP51163 265 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Rrp36Q3UFY0 244 aaKnown RBP10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Kctd1Q5M956 257 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 HrQ61645 1182 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Atg14Q8CDJ3 492 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Plcg2Q8CIH5 1265 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 DolkQ8R2Y3 534 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 PccaQ91ZA3 724 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Atp6v1g1Q9CR51 118 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Trim54Q9ERP3 366 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Sh3glb1Q9JK48 365 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Kiaa0232Q80U59 1396 aaKnown RBP10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Gm5134E9QAB5 671 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Pex5O09012 639 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Nmt2O70311 529 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Vps4bP46467 444 aaKnown RBP10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 VcpQ01853 806 aaKnown RBP10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Pfdn6Q03958 127 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Xxylt1Q3U4G3 392 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Fam92bQ3V2J0 292 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Znf652Q5DU09 608 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Znf513Q6PD29 541 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Dlgap3Q6PFD5 977 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Olfr297Q7TS07 310 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 HomezQ80W88 542 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Dapk2Q8VDF3 370 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Nmrk1Q91W63 195 aa10.76□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms