RNA–Protein interactions for RNA: ENSMUST00000029941.15

Pdlim5-201, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pdlim5, Length 5,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-201ENSMUST00000029941 Tlk2O55047 718 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Ppp4r3cQ3V0Y1 813 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Trim38Q5SZ99 471 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Atp13a3Q5XF89 1219 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Sh3gl3Q62421 347 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Tfe3Q64092 572 aaKnown RBP13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Xlr3bQ6P205 226 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Cabcoco1Q8CDT7 208 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Homer2Q9QWW1 354 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Entpd5Q9WUZ9 427 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Myh1Q5SX40 1942 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Gm3371F7CQW8 167 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Usp35M0QWN7 1009 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Trim43cP86449 446 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Psmd6Q99JI4 389 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 PrameQ9D4Z5 464 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Gm8298J3QPI0 401 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Rnf113a2Q14B01 337 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Mettl17Q3U2U7 461 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 SpidrQ8BGX7 933 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Tmem145Q8C4U2 746 aa13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Ddx56Q9D0R4 546 aaKnown RBP13.07□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Agxt2Q3UEG6 513 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Ppp2r5cQ60996 524 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Ino80dQ66JY2 873 aaKnown RBP13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Znf579Q80VM4 562 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 CcnyQ8BGU5 341 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 NemfQ8CCP0 1064 aaKnown RBP13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Btbd6Q8K2J9 488 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Fgfr1op2Q9CRA9 253 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Sertad2Q9JJG5 309 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Ddx20Q9JJY4 825 aaKnown RBP13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Nfu1Q9QZ23 255 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Fam81bA0A140LI28 432 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Hoxc10P31257 342 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Rad54lP70270 747 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Q3TQQ9 903 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Hsph1Q61699 858 aaKnown RBP13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Sh3gl2Q62420 352 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Ptk6Q64434 451 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Klhl14Q69ZK5 630 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Zdhhc14Q8BQQ1 489 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Hars2Q99KK9 505 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 MyocO70624 490 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Micall2Q3TN34 1009 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Cep57Q8CEE0 500 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Q9CYI0 393 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Abcb11Q9QY30 1321 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Chrna9G3X8Z7 479 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Vmn2r77L7N2B7 854 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 EsrraO08580 422 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Vars2Q3U2A8 1060 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Ice2Q3UZ18 988 aaKnown RBP13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 PapolaQ61183 739 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Sema5aQ62217 1077 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Kcnk18Q6VV64 394 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Tarsl2Q8BLY2 790 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Pih1h3bQ8C6P5 218 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Ppp4r1Q8K2V1 951 aa13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Pdxdc1Q99K01 787 aaKnown RBP13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Mrpl2Q9D773 306 aaKnown RBP13.06□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Mdm4O35618 489 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Eif3eP60229 445 aaKnown RBP13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Spout1Q3UHX9 385 aaKnown RBP13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Tceal1Q921P9 165 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Emc2Q9CRD2 297 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 MrgbpQ9DAT2 204 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Efna5O08543 228 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 StrnO55106 780 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Cyp2c67Q569X9 491 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Cage1Q5IR70 849 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 UvragQ8K245 698 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Rpn1Q91YQ5 608 aaKnown RBP13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Gins2Q9D600 185 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Grk1Q9WVL4 564 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Lonrf1D3YY23 762 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 SarsP26638 512 aaKnown RBP13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Plk4Q64702 925 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Acot5Q6Q2Z6 421 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Ccdc154Q6RUT8 657 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Q80Y73 168 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Upb1Q8VC97 393 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Krt5Q922U2 580 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Bzw1Q9CQC6 419 aaKnown RBP13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 March8Q9DBD2 286 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 AllcQ9JHX6 414 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Pja1O55176 578 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 RargP18911 458 aaKnown RBP13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Kpna2P52293 529 aaKnown RBP13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Pick1Q62083 416 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Actr5Q80US4 605 aaKnown RBP13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Olfml3Q8BK62 406 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 HscbQ8K3A0 234 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Spats2lQ91WJ7 558 aaKnown RBP13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Ubxn6Q99PL6 442 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Krt27Q9Z320 448 aa13.05□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 PrkceP16054 737 aa13.04□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Pdha1P35486 390 aaKnown RBP13.04□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 SftpdP50404 374 aa13.04□□□□□ -0.32
Pdlim5-201ENSMUST00000029941 Trpa1Q8BLA8 1125 aa13.04□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms