RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Tada2bD3Z4Z0 420 aaKnown RBP15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Arpp19P56212 112 aaKnown RBP15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Tfdp2Q64163 446 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Nqo1Q64669 274 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Tdpoz2Q717B2 364 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Fam102aQ78T81 392 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Thoc5Q8BKT7 683 aaKnown RBP15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Tex44Q9DA60 530 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Add3Q9QYB5 706 aaKnown RBP15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Cep170Q6A065 1588 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 NinQ61043 2035 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Gm32742A0A1B0GT42 1604 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Pfkfb3A7UAK5 555 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Gm3127E9Q9P5 263 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Gm3453K7N724 263 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Kcna3P16390 528 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Ttc39dQ0VF76 604 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Dok7Q18PE0 504 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Tmem192Q9CXT7 266 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Kif24Q6NWW5 1356 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Sf3b1Q99NB9 1304 aaKnown RBP15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Tmem120aQ8C1E7 343 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Ccdc81Q9D5W4 654 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Serpinb9bQ9DAV6 377 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Nr1h3Q9Z0Y9 445 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Krt2Q3TTY5 707 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Aifm3Q3TY86 605 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Pnma1Q8C1C8 353 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Fam32aQ9CR80 112 aaKnown RBP15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Erap1Q9EQH2 930 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Dgcr8Q9EQM6 773 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Trpv2Q9WTR1 756 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 TwistnbQ78WZ7 330 aaKnown RBP15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Gtf3c4Q8BMQ2 817 aaKnown RBP15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Eva1bQ8K2Y3 164 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Mageb3Q9D2H4 330 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Ap4s1Q9WVL1 144 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Mapk13Q9Z1B7 366 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Arhgap23Q69ZH9 1483 aa15.13■□□□□ 0.01
Col7a1-201ENSMUST00000026740 PyglQ9ET01 850 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Extl3Q9WVL6 918 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Mtmr1Q9Z2C4 669 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Mtmr2Q9Z2D1 643 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Mapk1P63085 358 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Pcsk1P63239 753 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Glt8d2Q640P4 349 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Tbc1d12Q6A039 696 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 BfarQ8R079 450 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Scg3P47867 471 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Vamp7P70280 220 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Gpsm2Q8VDU0 679 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Rbm42Q91V81 474 aaKnown RBP15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Rsl24d1Q99L28 163 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Tlx1P43345 332 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Tbx1P70323 479 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Krt76Q3UV17 594 aaKnown RBP15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Mcf2lQ64096 1149 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Q8C5C9 218 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Capn9Q9D805 690 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Axin1O35625 863 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 BrafP28028 804 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Tsc22d1P62500 1077 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Tmprss15P97435 1069 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 NfibP97863 570 aaKnown RBP15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Mark3Q03141 753 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Serpina3mQ03734 418 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Nt5c3aQ9D020 331 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Skint6A7XUZ6 1240 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Vmn2r71L7N2D8 855 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 D1Pas1P16381 660 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Hspa9P38647 679 aaKnown RBP15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Lmbrd1Q8K0B2 537 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Klhl35Q9CZ49 574 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 IgfalsP70389 603 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 SftpdP50404 374 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Znf532Q6NXK2 1036 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Pcdhb14Q6PB90 796 aa15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Lsm7Q9CQQ8 103 aaKnown RBP15.12■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Cacna2d1O08532 1103 aa15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 FynP39688 537 aa15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Pkp1P97350 728 aaKnown RBP15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Ccdc85aQ5SP85 500 aa15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Fam120bQ6RI63 786 aa15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Mrpl4Q9DCU6 294 aaKnown RBP15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Rnf103Q9R1W3 683 aa15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Kctd14A0A0U1RNG7 287 aa15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Slc2a4P14142 509 aa15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Zbtb17Q60821 794 aa15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Kcna5Q61762 602 aa15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Oxsr1Q6P9R2 527 aa15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Pnma3Q8JZW8 466 aa15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Cse1lQ9ERK4 971 aaKnown RBP15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Zcchc17Q9ESX4 241 aaKnown RBP15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Acsl4Q9QUJ7 711 aa15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 4932414N04RikQ8CEQ9 752 aa15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 PygbQ8CI94 843 aaKnown RBP15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Defb15Q8R2I5 79 aa15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Adgrf5G5E8Q8 1348 aa15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 Card9A2AIV8 536 aa15.11■□□□□ 0.01
Col7a1-201ENSMUST00000026740 SarsP26638 512 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms