RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Gsdmc4Q3TR54 480 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Atxn7l3bQ3UD01 97 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Atp4aQ64436 1033 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 CcnyQ8BGU5 341 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ubap1Q8BH48 502 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Pcdha10Q91Y20 946 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Dnajc19Q9CQV7 116 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Myoz2Q9JJW5 264 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Smok2bQ9QYZ3 484 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Smok2aQ9QYZ6 504 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Gadd45gQ9Z111 159 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Adgra3Q7TT36 1310 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 A630010A05RikA9C473 232 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Rag1P15919 1040 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ccng1P51945 294 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Vamp7P70280 220 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Rbm46P86049 533 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Dsg1aQ61495 1057 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ppp2r5aQ6PD03 486 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 DaglaQ6WQJ1 1044 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 N4bp3Q8C7U1 537 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ago4Q8CJF8 861 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Lrrc42Q8R2U7 421 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Slc12a8Q8VI23 705 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Tceal1Q921P9 165 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Sertad2Q9JJG5 309 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 PygmQ9WUB3 842 aaKnown RBP13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 PapolbQ9WVP6 641 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 UrosP51163 265 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 GclcP97494 637 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Epha7Q61772 998 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Pja2Q80U04 707 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Rnaseh2bQ80ZV0 308 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 DcakdQ8BHC4 231 aaKnown RBP13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Kbtbd3Q8BHI4 607 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Fbxo28Q8BIG4 368 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Slc7a14Q8BXR1 771 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Phactr3Q8BYK5 558 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Atp5c1Q91VR2 298 aaKnown RBP13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Slc25a38Q91XD8 326 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ptdss1Q99LH2 473 aaKnown RBP13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Tlr3Q99MB1 905 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Rexo2Q9D8S4 237 aa13.48□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Mfsd4b4J3QNS5 503 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Rnaseh1O70338 285 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Mark3Q03141 753 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Fgfr4Q03142 799 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Dync1li1Q8R1Q8 523 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Oxnad1Q8VE38 311 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Bhmt2Q91WS4 363 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Afg3l1Q920A7 789 aaKnown RBP13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Dqx1Q924H9 718 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Taf11Q99JX1 211 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Mxra8Q9DBV4 442 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Nr1h3Q9Z0Y9 445 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Cfap44E9Q5M6 1843 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Slc6a16A0A1L1SR47 742 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Vmn2r77L7N2B7 854 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 AfmO89020 608 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Creb1Q01147 341 aaKnown RBP13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Srrm1Q52KI8 946 aaKnown RBP13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 FancbQ5XJY6 703 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ankrd6Q69ZU8 712 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 IgflQ6B9Z0 140 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Zfp454Q80Y34 536 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Gpr180Q8BPS4 441 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Zhx2Q8C0C0 836 aaKnown RBP13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Senp2Q91ZX6 588 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Med24Q99K74 987 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Dnaaf1Q9D2H9 634 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Abcg8Q9DBM0 673 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Lrp5Q91VN0 1614 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Rasa2P58069 847 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 SpoplQ2M2N2 392 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Abl2Q4JIM5 1182 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ece1Q4PZA2 769 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Phactr4Q501J7 694 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Kcnj11Q61743 390 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Atl2Q6PA06 583 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Zfp341Q6PGC9 846 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Dclre1bQ8C7W7 541 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Nudcd3Q8R1N4 363 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Sgms1Q8VCQ6 419 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Gpsm2Q8VDU0 679 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ccdc65Q8VHI7 493 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 FtcdQ91XD4 541 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 1700018B08RikQ9DA83 213 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 HemgnQ9ERZ0 503 aa13.47□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Gnat1P20612 350 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 FerP70451 823 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Pla2g4eQ50L42 875 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Orc2Q60862 576 aaKnown RBP13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Tarsl2Q8BLY2 790 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ythdf3Q8BYK6 585 aaKnown RBP13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Usp20Q8C6M1 916 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 HyiQ8R1F5 277 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ttc8Q8VD72 515 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 St13Q99L47 371 aaKnown RBP13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Pla2g12bQ99P27 195 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Lpin2Q99PI5 893 aa13.46□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms