RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Mybl1P51960 751 aa19.96■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Gm4952Q5FW57 296 aa19.96■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Znf618Q80YY7 953 aaKnown RBP19.96■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Sapcd2Q9D818 391 aa19.96■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Cyp2s1Q9DBX6 501 aa19.96■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Ripor3A1L3T7 938 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Apol8A2VDH7 339 aaKnown RBP19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Ptp4a2O70274 167 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Lmnb1P14733 588 aaKnown RBP19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 PtpreP49446 699 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 PklrP53657 574 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Map4k1P70218 827 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Aars2Q14CH7 980 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Pih1d3Q3KNI6 218 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Trim21Q62191 470 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 LnpkQ7TQ95 425 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Stard7Q8R1R3 373 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 AdigQ8R400 80 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Q9CYI0 393 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Pdk2Q9JK42 407 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 DgkhD3YXJ0 1156 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Olfr247E9PVJ7 320 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Gm6588E9Q3K0 461 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Olfr819K7N727 320 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Cd70O55237 195 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Zfy1P10925 782 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Rnf10Q3UIW5 804 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Rnf139Q7TMV1 668 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 BrdtQ91Y44 956 aa19.95■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Gm13084A2A8N0 494 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Krt19P19001 403 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 RalaP63321 206 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Casp4P70343 373 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Soat1Q61263 540 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Tmc8Q7TN58 722 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Zswim6Q80TB7 1207 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Caskin2Q8VHK1 1201 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Gbp7Q91Z40 638 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Rilpl1Q9JJC6 406 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Gm5926E9PWJ8 236 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Nrg3O35181 713 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Oprl1P35377 367 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Adcy8P97490 1249 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Zfp953Q3UPV7 304 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Zbtb17Q60821 794 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 PrimpolQ6P1E7 537 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Cypt2Q6P924 180 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Q80WR5 230 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Creb3l2Q8BH52 521 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Agap1Q8BXK8 857 aaKnown RBP19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Znf654Q9DAU9 571 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Rbp7Q9EPC5 134 aa19.94■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 CopeO89079 308 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 NsfP46460 744 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Klra7Q60654 280 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Zfp120Q8BZW4 436 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Tll2Q9WVM6 1012 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 2210011C24RikA0A087WQ89 206 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Pgap3A2A559 320 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Birc5O70201 140 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Axin2O88566 840 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Tulp2P46686 562 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Sox10Q04888 466 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Grm2Q14BI2 872 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Abi3bpQ59IW6 1179 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Foxp3Q99JB6 429 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Mrpl2Q9D773 306 aaKnown RBP19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Rnf14Q9JI90 485 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Pard6bQ9JK83 371 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Olig1Q9JKN5 260 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Mpp2Q9WV34 552 aa19.93■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Casp8O89110 480 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Bace1P56818 501 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Trim72Q1XH17 477 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Capn13Q3UW68 665 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Fam118bQ8C569 351 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 PawrQ925B0 333 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Dnajc18Q9CZJ9 357 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 CsadQ9DBE0 493 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Zgrf1Q0VGT4 1863 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Wdr95D3Z7A8 784 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Gm1661E9Q963 441 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Gm7995L7N2E4 160 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Smarcad1Q04692 1021 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Col9a2Q07643 688 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Ppm1kQ8BXN7 372 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Olfr1502Q8VG66 316 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Pcdha2Q91Y17 948 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Mfsd5Q921Y4 450 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Isl2Q9CXV0 359 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Ly6iQ9WU67 134 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Snx1Q9WV80 522 aa19.92■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 IqccA2ADZ8 418 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Fmr1P35922 614 aaKnown RBP19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Foxp2P58463 714 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Q32P12 615 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Frmd5Q6P5H6 517 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 SnphQ80U23 495 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 Rhot1Q8BG51 631 aa19.91■□□□□ 0.78
Shkbp1-201ENSMUST00000003857 RbakQ8BQC8 711 aa19.91■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms