RNA–Protein interactions for RNA: YPR054W

SMK1, Transcript of Middle sporulation-specific mitogen-activated protein kinase (MAPK), yeastyeast

Gene SMK1, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMK1YPR054W RPL9AP05738 191 aaKnown RBP6.12□□□□□ -1.43
SMK1YPR054W HIP1P06775 603 aa6.12□□□□□ -1.43
SMK1YPR054W TY2A-LR1P0C2J4 438 aa6.12□□□□□ -1.43
SMK1YPR054W TY2A-FP0CX61 438 aa6.12□□□□□ -1.43
SMK1YPR054W TY2A-GR2P0CX62 438 aa6.12□□□□□ -1.43
SMK1YPR054W PET18P25362 215 aa6.12□□□□□ -1.43
SMK1YPR054W TY2A-CP25383 438 aa6.12□□□□□ -1.43
SMK1YPR054W GMH1P36125 273 aa6.12□□□□□ -1.43
SMK1YPR054W MRPL27P36526 146 aaPredicted RBP6.12□□□□□ -1.43
SMK1YPR054W FAT1P38225 669 aa6.12□□□□□ -1.43
SMK1YPR054W YEL068CP39977 110 aa6.12□□□□□ -1.43
SMK1YPR054W SMB1P40018 196 aaKnown RBP6.12□□□□□ -1.43
SMK1YPR054W YIL060WP40519 144 aa6.12□□□□□ -1.43
SMK1YPR054W IRC24P40580 263 aa6.12□□□□□ -1.43
SMK1YPR054W CIN5P40917 295 aa6.12□□□□□ -1.43
SMK1YPR054W OTU1P43558 301 aa6.12□□□□□ -1.43
SMK1YPR054W OST3P48439 350 aa6.12□□□□□ -1.43
SMK1YPR054W AMA1P50082 593 aa6.12□□□□□ -1.43
SMK1YPR054W RPL9BP51401 191 aaKnown RBP6.12□□□□□ -1.43
SMK1YPR054W NIF3P53081 288 aa6.12□□□□□ -1.43
SMK1YPR054W PRM1P53835 661 aa6.12□□□□□ -1.43
SMK1YPR054W SMX3P54999 86 aaPredicted RBP6.12□□□□□ -1.43
SMK1YPR054W STD1Q02794 444 aa6.12□□□□□ -1.43
SMK1YPR054W MRP51Q02950 344 aa6.12□□□□□ -1.43
SMK1YPR054W TY2A-DR2Q03483 438 aa6.12□□□□□ -1.43
SMK1YPR054W RBS1Q05672 457 aaKnown RBP6.12□□□□□ -1.43
SMK1YPR054W YFT2Q06676 274 aa6.12□□□□□ -1.43
SMK1YPR054W RRT7Q07829 113 aa6.12□□□□□ -1.43
SMK1YPR054W FDH1Q08911 376 aa6.12□□□□□ -1.43
SMK1YPR054W TY2A-BQ12260 438 aa6.12□□□□□ -1.43
SMK1YPR054W TY2A-OR2Q12293 438 aa6.12□□□□□ -1.43
SMK1YPR054W TY2A-DR1Q12392 438 aa6.12□□□□□ -1.43
SMK1YPR054W PDH1Q12428 516 aaKnown RBP6.12□□□□□ -1.43
SMK1YPR054W TY2A-OR1Q12439 438 aa6.12□□□□□ -1.43
SMK1YPR054W TY2A-DR3Q99303 438 aa6.12□□□□□ -1.43
SMK1YPR054W CHO1P08456 276 aa6.11□□□□□ -1.43
SMK1YPR054W MATALPHA1P0CY06 175 aa6.11□□□□□ -1.43
SMK1YPR054W HMLALPHA1P0CY07 175 aa6.11□□□□□ -1.43
SMK1YPR054W RNA15P25299 296 aaPredicted RBP6.11□□□□□ -1.43
SMK1YPR054W TIM23P32897 222 aa6.11□□□□□ -1.43
SMK1YPR054W PPZ2P33329 710 aa6.11□□□□□ -1.43
SMK1YPR054W YJL068CP40363 299 aa6.11□□□□□ -1.43
SMK1YPR054W ICE2P40499 491 aa6.11□□□□□ -1.43
SMK1YPR054W YJR012CP47087 207 aa6.11□□□□□ -1.43
SMK1YPR054W NNF1P47149 201 aa6.11□□□□□ -1.43
SMK1YPR054W BNS1P50084 137 aa6.11□□□□□ -1.43
SMK1YPR054W UBP8P50102 471 aa6.11□□□□□ -1.43
SMK1YPR054W NSA1P53136 463 aaPredicted RBP6.11□□□□□ -1.43
SMK1YPR054W YGL101WP53144 215 aa6.11□□□□□ -1.43
SMK1YPR054W NPY1P53164 384 aa6.11□□□□□ -1.43
SMK1YPR054W YNL134CP53912 376 aaKnown RBP6.11□□□□□ -1.43
SMK1YPR054W TMA23Q03525 211 aa6.11□□□□□ -1.43
SMK1YPR054W RSF1Q05043 376 aa6.11□□□□□ -1.43
SMK1YPR054W FRQ1Q06389 190 aa6.11□□□□□ -1.43
SMK1YPR054W YLR012CQ07927 99 aa6.11□□□□□ -1.43
SMK1YPR054W YLR146W-AQ2V2P1 62 aa6.11□□□□□ -1.43
SMK1YPR054W DFR1P07807 211 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
SMK1YPR054W RIP1P08067 215 aa6.1□□□□□ -1.43
SMK1YPR054W MET3P08536 511 aa6.1□□□□□ -1.43
SMK1YPR054W PAU19P0CE85 124 aa6.1□□□□□ -1.43
SMK1YPR054W PAU21P0CE86 164 aa6.1□□□□□ -1.43
SMK1YPR054W PAU22P0CE87 164 aa6.1□□□□□ -1.43
SMK1YPR054W POX1P13711 748 aa6.1□□□□□ -1.43
SMK1YPR054W YCR100CP25606 316 aa6.1□□□□□ -1.43
SMK1YPR054W PAU3P25610 124 aa6.1□□□□□ -1.43
SMK1YPR054W MRPL11P36521 249 aaPredicted RBP6.1□□□□□ -1.43
SMK1YPR054W MRPS9P38120 278 aa6.1□□□□□ -1.43
SMK1YPR054W CHK1P38147 527 aa6.1□□□□□ -1.43
SMK1YPR054W TRS20P38334 175 aa6.1□□□□□ -1.43
SMK1YPR054W TIM17P39515 158 aa6.1□□□□□ -1.43
SMK1YPR054W DLS1P40366 167 aa6.1□□□□□ -1.43
SMK1YPR054W CFD1P40558 293 aa6.1□□□□□ -1.43
SMK1YPR054W CIN2P46670 268 aa6.1□□□□□ -1.43
SMK1YPR054W SEC13Q04491 297 aaKnown RBP6.1□□□□□ -1.43
SMK1YPR054W BSP1Q06604 576 aa6.1□□□□□ -1.43
SMK1YPR054W PEX11Q12462 236 aa6.1□□□□□ -1.43
SMK1YPR054W CPR4P25334 318 aa6.09□□□□□ -1.43
SMK1YPR054W RNQ1P25367 405 aa6.09□□□□□ -1.43
SMK1YPR054W ATG15P25641 520 aa6.09□□□□□ -1.43
SMK1YPR054W FUN19P28003 413 aaPredicted RBP6.09□□□□□ -1.43
SMK1YPR054W TRR1P29509 319 aaKnown RBP6.09□□□□□ -1.43
SMK1YPR054W DCG1P32460 244 aa6.09□□□□□ -1.43
SMK1YPR054W CSE2P33308 149 aa6.09□□□□□ -1.43
SMK1YPR054W INM1P38710 295 aa6.09□□□□□ -1.43
SMK1YPR054W YHR097CP38809 366 aaKnown RBP6.09□□□□□ -1.43
SMK1YPR054W SYS1P41544 203 aa6.09□□□□□ -1.43
SMK1YPR054W YGL204CP53089 101 aa6.09□□□□□ -1.43
SMK1YPR054W ADD37Q03233 198 aa6.09□□□□□ -1.43
SMK1YPR054W YLR456WQ06199 204 aa6.09□□□□□ -1.43
SMK1YPR054W PIN3Q06449 215 aa6.09□□□□□ -1.43
SMK1YPR054W YOR365CQ08844 703 aa6.09□□□□□ -1.43
SMK1YPR054W POM33Q12164 279 aa6.09□□□□□ -1.43
SMK1YPR054W GAL4P04386 881 aa6.08□□□□□ -1.44
SMK1YPR054W STE4P18851 423 aa6.08□□□□□ -1.44
SMK1YPR054W DAL3P32459 195 aa6.08□□□□□ -1.44
SMK1YPR054W FMT1P32785 401 aa6.08□□□□□ -1.44
SMK1YPR054W AIM29P36154 155 aa6.08□□□□□ -1.44
SMK1YPR054W SDS24P38314 527 aa6.08□□□□□ -1.44
SMK1YPR054W DBP8P38719 431 aa6.08□□□□□ -1.44
SMK1YPR054W PCL5P38794 229 aa6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms