RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W YIA6P40556 373 aa2.2□□□□□ -2.06
CST9YLR394W HSH155P49955 971 aaKnown RBP2.2□□□□□ -2.06
CST9YLR394W SWT21P53873 357 aaPredicted RBP2.2□□□□□ -2.06
CST9YLR394W NNT1Q05874 261 aa2.2□□□□□ -2.06
CST9YLR394W SUE1Q06524 206 aa2.2□□□□□ -2.06
CST9YLR394W ACC1Q00955 2233 aaKnown RBP2.2□□□□□ -2.06
CST9YLR394W CSF1Q12150 2958 aa2.2□□□□□ -2.06
CST9YLR394W FKS1P38631 1876 aaKnown RBP2.2□□□□□ -2.06
CST9YLR394W ILV1P00927 576 aaKnown RBP2.19□□□□□ -2.06
CST9YLR394W COS2P0CX12 379 aa2.19□□□□□ -2.06
CST9YLR394W COS3P0CX13 379 aa2.19□□□□□ -2.06
CST9YLR394W MIG1P27705 504 aa2.19□□□□□ -2.06
CST9YLR394W TRM7P38238 310 aaKnown RBP2.19□□□□□ -2.06
CST9YLR394W PEX18P38855 283 aa2.19□□□□□ -2.06
CST9YLR394W OST3P48439 350 aa2.19□□□□□ -2.06
CST9YLR394W YPL039WQ03080 316 aa2.19□□□□□ -2.06
CST9YLR394W TVP15Q03860 143 aa2.19□□□□□ -2.06
CST9YLR394W SFH1Q06168 426 aa2.19□□□□□ -2.06
CST9YLR394W RRP36Q12481 300 aaPredicted RBP2.19□□□□□ -2.06
CST9YLR394W YBL112CQ3E7Y4 105 aa2.19□□□□□ -2.06
CST9YLR394W TDA11P38854 504 aa2.18□□□□□ -2.06
CST9YLR394W YGL088WP53151 121 aa2.18□□□□□ -2.06
CST9YLR394W IGO1P53897 168 aa2.18□□□□□ -2.06
CST9YLR394W SWS2P53937 143 aa2.18□□□□□ -2.06
CST9YLR394W COQ1P18900 473 aa2.17□□□□□ -2.06
CST9YLR394W KRE6P32486 720 aa2.17□□□□□ -2.06
CST9YLR394W CAT2P32796 670 aaKnown RBP2.17□□□□□ -2.06
CST9YLR394W RTT105P40063 208 aa2.17□□□□□ -2.06
CST9YLR394W NBP35P52920 328 aa2.17□□□□□ -2.06
CST9YLR394W MIG2P53035 382 aa2.17□□□□□ -2.06
CST9YLR394W YNL095CP53932 642 aa2.17□□□□□ -2.06
CST9YLR394W DIA1P54005 336 aa2.17□□□□□ -2.06
CST9YLR394W YMR166CQ03829 368 aa2.17□□□□□ -2.06
CST9YLR394W YLL007CQ07799 665 aa2.17□□□□□ -2.06
CST9YLR394W MRX4Q12467 430 aa2.17□□□□□ -2.06
CST9YLR394W BEM2P39960 2167 aaKnown RBP2.17□□□□□ -2.06
CST9YLR394W YAL064W-BO13512 126 aa2.17□□□□□ -2.06
CST9YLR394W HIS3P06633 220 aa2.17□□□□□ -2.06
CST9YLR394W RPL40AP0CH08 128 aaKnown RBP2.17□□□□□ -2.06
CST9YLR394W RPL40BP0CH09 128 aaKnown RBP2.17□□□□□ -2.06
CST9YLR394W SNA3P14359 133 aa2.17□□□□□ -2.06
CST9YLR394W RIB7P33312 244 aa2.17□□□□□ -2.06
CST9YLR394W HMT1P38074 348 aa2.17□□□□□ -2.06
CST9YLR394W HSM3P38348 480 aa2.17□□□□□ -2.06
CST9YLR394W SUR2P38992 349 aa2.17□□□□□ -2.06
CST9YLR394W COA1P40452 197 aa2.17□□□□□ -2.06
CST9YLR394W PIR5P46999 287 aa2.17□□□□□ -2.06
CST9YLR394W MNT4P53745 580 aa2.17□□□□□ -2.06
CST9YLR394W ALG9P53868 555 aaKnown RBP2.17□□□□□ -2.06
CST9YLR394W FCF1Q05498 189 aaPredicted RBP2.17□□□□□ -2.06
CST9YLR394W SEC10Q06245 871 aa2.17□□□□□ -2.06
CST9YLR394W FEX1Q08913 375 aa2.17□□□□□ -2.06
CST9YLR394W FEX2Q08991 375 aa2.17□□□□□ -2.06
CST9YLR394W RIF1P29539 1916 aa2.16□□□□□ -2.06
CST9YLR394W YLR422WQ06409 1932 aa2.16□□□□□ -2.06
CST9YLR394W ZWF1P11412 505 aaKnown RBP2.16□□□□□ -2.06
CST9YLR394W ERG2P32352 222 aa2.16□□□□□ -2.06
CST9YLR394W DRE2P36152 348 aa2.16□□□□□ -2.06
CST9YLR394W PHO89P38361 574 aa2.16□□□□□ -2.06
CST9YLR394W ARN2P38724 620 aa2.16□□□□□ -2.06
CST9YLR394W BUD13P46947 266 aaPredicted RBP2.16□□□□□ -2.06
CST9YLR394W COG7P53195 279 aa2.16□□□□□ -2.06
CST9YLR394W GMC2Q06201 188 aa2.16□□□□□ -2.06
CST9YLR394W RLP24Q07915 199 aaKnown RBP2.16□□□□□ -2.06
CST9YLR394W TIM22Q12328 207 aa2.16□□□□□ -2.06
CST9YLR394W AI5_BETAQ9ZZX0 354 aa2.16□□□□□ -2.06
CST9YLR394W COX2P00410 251 aa2.15□□□□□ -2.07
CST9YLR394W VPS1P21576 704 aaKnown RBP2.15□□□□□ -2.07
CST9YLR394W TOM40P23644 387 aaKnown RBP2.15□□□□□ -2.07
CST9YLR394W YHL049CP38722 271 aa2.15□□□□□ -2.07
CST9YLR394W RCY1P39531 840 aa2.15□□□□□ -2.07
CST9YLR394W NPT1P39683 429 aaKnown RBP2.15□□□□□ -2.07
CST9YLR394W CTS2Q06350 511 aa2.15□□□□□ -2.07
CST9YLR394W CLP1Q08685 445 aaPredicted RBP2.15□□□□□ -2.07
CST9YLR394W AGC1Q12482 902 aa2.15□□□□□ -2.07
CST9YLR394W NCB2Q92317 146 aa2.15□□□□□ -2.07
CST9YLR394W YOS9Q99220 542 aa2.15□□□□□ -2.07
CST9YLR394W YMR316C-AI2HB70 103 aa2.14□□□□□ -2.07
CST9YLR394W POL30P15873 258 aaKnown RBP2.14□□□□□ -2.07
CST9YLR394W CSG2P35206 410 aa2.14□□□□□ -2.07
CST9YLR394W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
CST9YLR394W EBP2P36049 427 aaKnown RBP2.14□□□□□ -2.07
CST9YLR394W MRPL37P36532 105 aa2.14□□□□□ -2.07
CST9YLR394W PRM9P39551 298 aa2.14□□□□□ -2.07
CST9YLR394W YER188WP40103 239 aa2.14□□□□□ -2.07
CST9YLR394W RPE1P46969 238 aa2.14□□□□□ -2.07
CST9YLR394W MRX5P47007 382 aa2.14□□□□□ -2.07
CST9YLR394W YJL118WP47022 219 aa2.14□□□□□ -2.07
CST9YLR394W NBP1P52919 319 aaPredicted RBP2.14□□□□□ -2.07
CST9YLR394W ATC1Q04005 294 aa2.14□□□□□ -2.07
CST9YLR394W YDR114CQ04597 100 aa2.14□□□□□ -2.07
CST9YLR394W YOL019WQ08157 551 aa2.14□□□□□ -2.07
CST9YLR394W NOT5Q12514 560 aaPredicted RBP2.14□□□□□ -2.07
CST9YLR394W PDR18P53756 1333 aa2.14□□□□□ -2.07
CST9YLR394W YPR096CO13587 100 aa2.13□□□□□ -2.07
CST9YLR394W MET16P18408 261 aaPredicted RBP2.13□□□□□ -2.07
CST9YLR394W RSA4P25382 515 aaKnown RBP2.13□□□□□ -2.07
CST9YLR394W PEX3P28795 441 aa2.13□□□□□ -2.07
CST9YLR394W RPT5P33297 434 aaKnown RBP2.13□□□□□ -2.07
CST9YLR394W KAP114P53067 1004 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms