RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W YCR041WP37265 110 aa1.67□□□□□ -2.14
CFT2YLR115W RFS1P38234 210 aaKnown RBP1.67□□□□□ -2.14
CFT2YLR115W SHE3P38272 425 aaKnown RBP1.67□□□□□ -2.14
CFT2YLR115W RCK1P38622 512 aa1.67□□□□□ -2.14
CFT2YLR115W WSC4P38739 605 aa1.67□□□□□ -2.14
CFT2YLR115W GEP4P38812 185 aa1.67□□□□□ -2.14
CFT2YLR115W YJR079WP47126 109 aa1.67□□□□□ -2.14
CFT2YLR115W MGA1P53050 456 aa1.67□□□□□ -2.14
CFT2YLR115W YGL039WP53183 348 aaKnown RBP1.67□□□□□ -2.14
CFT2YLR115W KTR5P53966 522 aaPredicted RBP1.67□□□□□ -2.14
CFT2YLR115W YMR279CQ03263 540 aa1.67□□□□□ -2.14
CFT2YLR115W PLP1Q04004 230 aa1.67□□□□□ -2.14
CFT2YLR115W YET2Q04210 160 aa1.67□□□□□ -2.14
CFT2YLR115W GRX8Q05926 109 aa1.67□□□□□ -2.14
CFT2YLR115W NOC4Q06512 552 aaPredicted RBP1.67□□□□□ -2.14
CFT2YLR115W HNT3Q08702 217 aa1.67□□□□□ -2.14
CFT2YLR115W NSL1Q12143 216 aa1.67□□□□□ -2.14
CFT2YLR115W YCT1Q12235 531 aa1.67□□□□□ -2.14
CFT2YLR115W ERV2Q12284 196 aa1.67□□□□□ -2.14
CFT2YLR115W SFM1Q12314 213 aa1.67□□□□□ -2.14
CFT2YLR115W RKM5Q12367 367 aa1.67□□□□□ -2.14
CFT2YLR115W PEX11Q12462 236 aa1.67□□□□□ -2.14
CFT2YLR115W HTZ1Q12692 134 aaKnown RBP1.67□□□□□ -2.14
CFT2YLR115W SLO1Q3E784 85 aa1.67□□□□□ -2.14
CFT2YLR115W REP1P03871 373 aa1.67□□□□□ -2.14
CFT2YLR115W CMD1P06787 147 aaKnown RBP1.67□□□□□ -2.14
CFT2YLR115W URA6P15700 204 aa1.67□□□□□ -2.14
CFT2YLR115W SPS18P32572 300 aa1.67□□□□□ -2.14
CFT2YLR115W IST2P38250 946 aa1.67□□□□□ -2.14
CFT2YLR115W SPL2P38839 148 aa1.67□□□□□ -2.14
CFT2YLR115W YMR144WP40214 342 aaKnown RBP1.67□□□□□ -2.14
CFT2YLR115W ALG8P40351 577 aa1.67□□□□□ -2.14
CFT2YLR115W SLM1P40485 686 aa1.67□□□□□ -2.14
CFT2YLR115W ALB1P47019 175 aaPredicted RBP1.67□□□□□ -2.14
CFT2YLR115W ALG13P53178 202 aa1.67□□□□□ -2.14
CFT2YLR115W POP6P53218 158 aa1.67□□□□□ -2.14
CFT2YLR115W SHY1P53266 389 aa1.67□□□□□ -2.14
CFT2YLR115W MTM1P53320 366 aa1.67□□□□□ -2.14
CFT2YLR115W MSO1P53604 210 aaKnown RBP1.67□□□□□ -2.14
CFT2YLR115W NRK1P53915 240 aa1.67□□□□□ -2.14
CFT2YLR115W YLR152CP54072 576 aa1.67□□□□□ -2.14
CFT2YLR115W NUP49Q02199 472 aa1.67□□□□□ -2.14
CFT2YLR115W RMI1Q02685 241 aa1.67□□□□□ -2.14
CFT2YLR115W RAV2Q03956 351 aa1.67□□□□□ -2.14
CFT2YLR115W VBA1Q04301 562 aa1.67□□□□□ -2.14
CFT2YLR115W CSM3Q04659 317 aa1.67□□□□□ -2.14
CFT2YLR115W SFH1Q06168 426 aa1.67□□□□□ -2.14
CFT2YLR115W DXO1Q06349 442 aa1.67□□□□□ -2.14
CFT2YLR115W YNG1Q08465 219 aa1.67□□□□□ -2.14
CFT2YLR115W FCY22Q12119 530 aa1.67□□□□□ -2.14
CFT2YLR115W YLR050CQ12155 161 aaKnown RBP1.67□□□□□ -2.14
CFT2YLR115W MDM32Q12171 622 aa1.67□□□□□ -2.14
CFT2YLR115W YCL012CQ8J0M4 134 aa1.67□□□□□ -2.14
CFT2YLR115W Q0144Q9ZZW2 109 aa1.67□□□□□ -2.14
CFT2YLR115W RPL31AP0C2H8 113 aaKnown RBP1.66□□□□□ -2.14
CFT2YLR115W ASP3-2P0CX77 362 aa1.66□□□□□ -2.14
CFT2YLR115W ASP3-3P0CX78 362 aa1.66□□□□□ -2.14
CFT2YLR115W ASP3-4P0CX79 362 aa1.66□□□□□ -2.14
CFT2YLR115W ASP3-1P0CZ17 362 aa1.66□□□□□ -2.14
CFT2YLR115W RPL4AP10664 362 aaKnown RBP1.66□□□□□ -2.14
CFT2YLR115W CUP2P15315 225 aa1.66□□□□□ -2.14
CFT2YLR115W CPT1P17898 393 aa1.66□□□□□ -2.14
CFT2YLR115W SLY1P22213 666 aa1.66□□□□□ -2.14
CFT2YLR115W YCR007CP25354 239 aa1.66□□□□□ -2.14
CFT2YLR115W POF1P25576 258 aa1.66□□□□□ -2.14
CFT2YLR115W TAH1P25638 111 aaPredicted RBP1.66□□□□□ -2.14
CFT2YLR115W MGT1P26188 188 aa1.66□□□□□ -2.14
CFT2YLR115W QRI5P32344 111 aa1.66□□□□□ -2.14
CFT2YLR115W MKK1P32490 508 aa1.66□□□□□ -2.14
CFT2YLR115W YCR087C-AP37263 153 aa1.66□□□□□ -2.14
CFT2YLR115W RCK2P38623 610 aa1.66□□□□□ -2.14
CFT2YLR115W YHK8P38776 514 aa1.66□□□□□ -2.14
CFT2YLR115W JHD2P47156 728 aaPredicted RBP1.66□□□□□ -2.14
CFT2YLR115W RPL4BP49626 362 aaKnown RBP1.66□□□□□ -2.14
CFT2YLR115W YIP1P53039 248 aa1.66□□□□□ -2.14
CFT2YLR115W MST27P53176 234 aa1.66□□□□□ -2.14
CFT2YLR115W WSC2P53832 503 aa1.66□□□□□ -2.14
CFT2YLR115W GOR1P53839 350 aa1.66□□□□□ -2.14
CFT2YLR115W ADD37Q03233 198 aa1.66□□□□□ -2.14
CFT2YLR115W SEC13Q04491 297 aaKnown RBP1.66□□□□□ -2.14
CFT2YLR115W MRPL51Q06090 140 aaPredicted RBP1.66□□□□□ -2.14
CFT2YLR115W YLR030WQ07967 263 aa1.66□□□□□ -2.14
CFT2YLR115W RRG7Q08774 242 aaPredicted RBP1.66□□□□□ -2.14
CFT2YLR115W TPO4Q12256 659 aa1.66□□□□□ -2.14
CFT2YLR115W YPL119C-AQ3E751 87 aa1.66□□□□□ -2.14
CFT2YLR115W IGO2Q9P305 131 aa1.66□□□□□ -2.14
CFT2YLR115W SEC16P48415 2195 aaKnown RBP1.66□□□□□ -2.14
CFT2YLR115W COX5AP00424 153 aa1.66□□□□□ -2.14
CFT2YLR115W CDC28P00546 298 aaKnown RBP1.66□□□□□ -2.14
CFT2YLR115W COS2P0CX12 379 aa1.66□□□□□ -2.14
CFT2YLR115W COS3P0CX13 379 aa1.66□□□□□ -2.14
CFT2YLR115W TFS1P14306 219 aa1.66□□□□□ -2.14
CFT2YLR115W SEC14P24280 304 aaKnown RBP1.66□□□□□ -2.14
CFT2YLR115W LSB5P25369 354 aa1.66□□□□□ -2.14
CFT2YLR115W YCR102CP25608 368 aa1.66□□□□□ -2.14
CFT2YLR115W SUA7P29055 345 aaPredicted RBP1.66□□□□□ -2.14
CFT2YLR115W MDH3P32419 343 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
CFT2YLR115W SPT4P32914 102 aaPredicted RBP1.66□□□□□ -2.14
CFT2YLR115W TIP20P33891 701 aa1.66□□□□□ -2.14
CFT2YLR115W CSG2P35206 410 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms